DRSC/TRiP Functional Genomics Resources

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Protein Alignment CycA and CYCB1;5

DIOPT Version :9

Sequence 1:NP_524030.2 Gene:CycA / 39340 FlyBaseID:FBgn0000404 Length:491 Species:Drosophila melanogaster
Sequence 2:NP_001320187.1 Gene:CYCB1;5 / 840348 AraportID:AT1G34460 Length:498 Species:Arabidopsis thaliana


Alignment Length:443 Identity:112/443 - (25%)
Similarity:179/443 - (40%) Gaps:142/443 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 GIKIP---AGVKNTKQ----------PLAVIGGKAEKNALAP-----RANFAV--------LNGN 55
            |:||.   ..|||.:.          | .|.||||:.....|     ||....        :||:
plant   131 GLKIQNKNGAVKNRRALGDIGNLVSVP-GVQGGKAQPPINRPITLSFRAQLLANAQLERKPINGD 194

  Fly    56 NNVPRPAGKVQVFRDVRNLNVDENVEYGAKKSNVVPVVEQFKTFSVYEDNNDTQVAPSGKSLASL 120
            |.||....|.|... .||......|:    |.|:| |.:|.|...|.|...:.|    .|:...:
plant   195 NKVPALGPKSQPLA-ARNPEAQRAVQ----KKNLV-VKQQTKPVEVIETKRNAQ----SKAACGI 249

  Fly   121 VDKENHDVKFGAGQKELVDYDLDSTPMSVTDVQSPMSVDRSILGVIQSSDISVGTETGVSPTGRV 185
            |:|           .:::|.|                                            
plant   250 VNK-----------PKILDID-------------------------------------------- 259

  Fly   186 KELPPRNDRQRFLEVVQYQMDILEYFRESEKKHRPKPLYMRRQKDISHNMRSILIDWLVEVSEEY 250
                 .:|:...:..|:|..|:..:::|.||:.:|| :||..|.:::..||:||||||:||..::
plant   260 -----ESDKDNHVAAVEYVDDMYSFYKEVEKESQPK-MYMHIQTEMNEKMRAILIDWLLEVHIKF 318

  Fly   251 KLDTETLYLSVFYLDRFLSQMAVVRSKLQLVGTAAMYIAAKYEEIYPPEVGEFVFLTDDSYTKAQ 315
            :|:.|||||:|..:||||...||.:.:||                    |.:.|::||::|:..|
plant   319 ELNLETLYLTVNIIDRFLYVKAVPKRELQ--------------------VNDLVYVTDNAYSSRQ 363

  Fly   316 VLRMEQVILKILSFDLCTPTAYVFINTY--AVLCDMPE------------KLKYMTLYI----SE 362
            :|.|::.||..|.:.|..||.|||:..:  |.:.| ||            |.|..::.:    |.
plant   364 ILVMKKAILGNLEWYLTIPTQYVFLFCFIKASISD-PEVLHVQKKNLQASKTKSFSIQVLSFSSH 427

  Fly   363 LSLMEGETYLQYLPSLMSSASVALARHILGMEMWTPRLEEITTYKLEDLKTVV 415
            .|:::.:.:.:.........::|...|:...|.|.   |.:|  ||:|.:|.|
plant   428 KSIVKSDQFCKKFNLCQEVTALASEFHLGNCEAWR---ETVT--KLKDPETKV 475

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CycANP_524030.2 Cyclin_N 206..332 CDD:278560 45/125 (36%)
Cyclin_C 334..450 CDD:281044 24/100 (24%)
CYCB1;5NP_001320187.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5024
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D993640at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100199
Panther 1 1.100 - - O PTHR10177
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X94
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
76.820

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