DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CycA and CYCA2;1

DIOPT Version :9

Sequence 1:NP_524030.2 Gene:CycA / 39340 FlyBaseID:FBgn0000404 Length:491 Species:Drosophila melanogaster
Sequence 2:NP_001332473.1 Gene:CYCA2;1 / 832610 AraportID:AT5G25380 Length:443 Species:Arabidopsis thaliana


Alignment Length:446 Identity:144/446 - (32%)
Similarity:216/446 - (48%) Gaps:65/446 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    39 EKNALAPRANFAVLNGNNNVPRPAGKVQVFRDVRNLNVDENVEYGAKK--SNVVPVVEQFKTFSV 101
            :.|....|:....|..:|:..:||.|.:..|..|..|         |:  |:.:.|..| |..:|
plant    23 DNNVRVTRSRAKALGVSNSPSKPAFKHETKRVARPSN---------KRMASDNITVCNQ-KRRAV 77

  Fly   102 YEDNNDTQVAPSGKSLA-SLVDKENHDVKFGAGQKELVDYDLDSTPMSVTDVQSPMSVDRSILGV 165
            .:|..:|        || |::..|.:......|.||....:.|.. :.|...:|.::.|.|.:.:
plant    78 LKDVTNT--------LAESIISTEGNVKACKRGGKETKQIEEDGL-VDVDGEKSKLAEDLSKIRM 133

  Fly   166 IQSSDISVGTETGVSPTGRVKELPPRNDRQRFLEVVQ----------------YQMDILEYFRES 214
            ::|.|.|...:..|...        ..||....:.||                |...|.:....:
plant   134 VESLDASASKQKLVDCA--------EEDRSDVTDCVQIVDIDSGVQDPQFCSLYAASIYDSINVA 190

  Fly   215 EKKHRPKPLYM-RRQKDISHNMRSILIDWLVEVSEEYKLDTETLYLSVFYLDRFLSQMAVVRSKL 278
            |.:.||...|| :.|:||...||.|||||||||||||||.::||||:|..:|||:|...:.:.||
plant   191 ELEQRPSTSYMVQVQRDIDPTMRGILIDWLVEVSEEYKLVSDTLYLTVNLIDRFMSHNYIEKQKL 255

  Fly   279 QLVGTAAMYIAAKYEEIYPPEVGEFVFLTDDSYTKAQVLRMEQVILKILSFDLCTPTAYVFINTY 343
            ||:|...|.||:|||||..|.:.||.|:||::||:.:||.||..:|..|.|.|..||...|:..:
plant   256 QLLGITCMLIASKYEEISAPRLEEFCFITDNTYTRLEVLSMEIKVLNSLHFRLSVPTTKTFLRRF 320

  Fly   344 AVLCDMPEK-----LKYMTLYISELSLMEGETYLQYLPSLMSSASVALARHILGM--EMWTPRLE 401
            .......:|     ::|:..|.:||:|.| .|:|::||||:::::|.|||..|..  ..|...|:
plant   321 IRAAQASDKVPLIEMEYLANYFAELTLTE-YTFLRFLPSLIAASAVFLARWTLDQSNHPWNQTLQ 384

  Fly   402 EITTYKLEDLKTVVLHLCHTHKTAKELNTQ-----AMREKYNRDTYKKVAMMESVE 452
            ..|.|:...||..||.:     ...:|||.     |:..|||:..:|:||.:.|.|
plant   385 HYTRYETSALKNTVLAM-----EELQLNTSGSTLIAIHTKYNQQKFKRVATLTSPE 435

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CycANP_524030.2 Cyclin_N 206..332 CDD:278560 63/126 (50%)
Cyclin_C 334..450 CDD:281044 39/127 (31%)
CYCA2;1NP_001332473.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 138 1.000 Domainoid score I1564
eggNOG 1 0.900 - - E1_COG5024
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 192 1.000 Inparanoid score I1366
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D993640at2759
OrthoFinder 1 1.000 - - FOG0000121
OrthoInspector 1 1.000 - - otm3250
orthoMCL 1 0.900 - - OOG6_100199
Panther 1 1.100 - - O PTHR10177
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X94
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
109.870

Return to query results.
Submit another query.