DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CycA and CYC3B

DIOPT Version :9

Sequence 1:NP_524030.2 Gene:CycA / 39340 FlyBaseID:FBgn0000404 Length:491 Species:Drosophila melanogaster
Sequence 2:NP_568248.2 Gene:CYC3B / 831001 AraportID:AT5G11300 Length:436 Species:Arabidopsis thaliana


Alignment Length:445 Identity:143/445 - (32%)
Similarity:213/445 - (47%) Gaps:90/445 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    46 RANFAVLNGNNNVP-RPAGKVQ----VFRDVRNLNVDENVEYGAKKSNVVPVVEQFKTFSVYEDN 105
            ||..|:..|.:..| :|:.|.|    |.:||.|.:.|.......|..|:                
plant    32 RAKKAMGRGVSIPPTKPSFKQQKRRAVLKDVSNTSADIIYSELRKGGNI---------------- 80

  Fly   106 NDTQVAPSGKSLASLVDKENHDVKFGAGQKE--LVDYDLDSTPMSVTDVQSPMSVDRSILGVIQS 168
                     |:....:.:.....|.||....  |||...:         :|.::.|.|.:.:.::
plant    81 ---------KANRKCLKEPKKAAKEGANSAMDILVDMHTE---------KSKLAEDLSKIRMAEA 127

  Fly   169 SDISVG-------TETGVSPTGRVKELPPRNDRQRFLEVVQ-------------YQMDILEYFRE 213
            .|:|:.       ||.....:| |.||         |:||.             |..||.:....
plant   128 QDVSLSNFKDEEITEQQEDGSG-VMEL---------LQVVDIDSNVEDPQCCSLYAADIYDNIHV 182

  Fly   214 SEKKHRPKPLYMRR-QKDISHNMRSILIDWLVEVSEEYKLDTETLYLSVFYLDRFLSQMAVVRSK 277
            :|.:.||...||.. |:||..:||.||||||||||::|||..:||||:|..:|||||...:.|.:
plant   183 AELQQRPLANYMELVQRDIDPDMRKILIDWLVEVSDDYKLVPDTLYLTVNLIDRFLSNSYIERQR 247

  Fly   278 LQLVGTAAMYIAAKYEEIYPPEVGEFVFLTDDSYTKAQVLRMEQVILKILSFDLCTPTAYVFINT 342
            |||:|.:.|.||:||||:..|.|.||.|:|.::||:.:||.||..||..:.|.|..||...|:..
plant   248 LQLLGVSCMLIASKYEELSAPGVEEFCFITANTYTRPEVLSMEIQILNFVHFRLSVPTTKTFLRR 312

  Fly   343 YAVLCDMPEK-----LKYMTLYISELSLMEGETYLQYLPSLMSSASVALARHILGM--EMWTPRL 400
            :........|     |:|:..|::||:|:| .::|::||||:::::|.|||..|..  ..|.|.|
plant   313 FIKAAQASYKVPFIELEYLANYLAELTLVE-YSFLRFLPSLIAASAVFLARWTLDQTDHPWNPTL 376

  Fly   401 EEITTYKLEDLKTVVLHLCHTHKTAKELNTQ-----AMREKYNRDTYKKVAMMES 450
            :..|.|::.:||..||.:     ...:|||.     |.|||||:..:|.||.:.|
plant   377 QHYTRYEVAELKNTVLAM-----EDLQLNTSGCTLAATREKYNQPKFKSVAKLTS 426

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CycANP_524030.2 Cyclin_N 206..332 CDD:278560 62/126 (49%)
Cyclin_C 334..450 CDD:281044 42/127 (33%)
CYC3BNP_568248.2 COG5024 4..418 CDD:227357 139/435 (32%)
Cyclin_N 175..302 CDD:365896 62/126 (49%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 138 1.000 Domainoid score I1564
eggNOG 1 0.900 - - E1_COG5024
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 192 1.000 Inparanoid score I1366
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D993640at2759
OrthoFinder 1 1.000 - - FOG0000121
OrthoInspector 1 1.000 - - otm3250
orthoMCL 1 0.900 - - OOG6_100199
Panther 1 1.100 - - O PTHR10177
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X94
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1110.870

Return to query results.
Submit another query.