DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CycA and CCNI2

DIOPT Version :9

Sequence 1:NP_524030.2 Gene:CycA / 39340 FlyBaseID:FBgn0000404 Length:491 Species:Drosophila melanogaster
Sequence 2:NP_001274181.1 Gene:CCNI2 / 645121 HGNCID:33869 Length:385 Species:Homo sapiens


Alignment Length:384 Identity:83/384 - (21%)
Similarity:137/384 - (35%) Gaps:112/384 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   142 LDSTPMS--VTDVQSP-----MSVDRSILGV-------------------------------IQS 168
            |...|.|  |:.||||     ..::.:.|||                               ..|
Human     7 LPPQPSSSEVSAVQSPGGRPGAGLEETALGVPLPPSPGEAPLPRSNRSRCPGTRQPGAASLHAAS 71

  Fly   169 SDISVGTETGVSPTGRV---------KELP--------PRN-----DRQRFLEVVQYQMDILEYF 211
            :.:.|....|.:|.|:.         ::.|        |||     |.:|.|..:|...|     
Human    72 AAVPVRPRRGTAPAGKTADAVPAAAPEQAPRPAPQSRKPRNLEGDLDERRLLCHLQLAQD----- 131

  Fly   212 RESEKKHRPKPLYMRRQKDISHNMRSILIDWLVEVSEEYKLDTETLYLSVFYLDRFLSQMAVVRS 276
            ||:......||     |.:|......::: ||:.:...:.....|..|::....|.|..:.|...
Human   132 REARLWRGGKP-----QDEICDAFEEVVL-WLLRLQNTFYFSQSTFNLALTIFGRLLISVKVKEK 190

  Fly   277 KLQLVGTAAMYIAAKY--EEIYPPEVGEFVFLTDDSYTKAQVLRMEQVILKILSFDLC--TPTAY 337
            .|......::.:|||.  ||.:.|:|.:|.......|:..::||||..||..|.:||.  ||..:
Human   191 YLHCATITSLRLAAKVNEEEEFIPQVKDFTKHYGSDYSPNELLRMELAILDRLHWDLYIGTPLDF 255

  Fly   338 VFINTYAVLC----------------DMPEKLKYM-----TLYISELS-----LMEGETYLQYLP 376
            :.|..|.|.|                ..|..|:.:     :|:::.|:     .|.|...||:..
Human   256 LTIEKYGVFCSNIKNHGLQFHALVVLSWPHVLELLPQRNPSLHVASLTRQLQHCMAGHQLLQFKG 320

  Fly   377 SLMSSASVALARHILGMEMW-TPRLEEITTYKLEDLKTVVLHLCHTHKTAKELNTQAMR 434
            |.::...:.|....| |..| .|..:.:...::.|::         :...|||..|.:|
Human   321 STLALVIITLELERL-MPGWCAPISDLLKKAQVGDMQ---------YSCCKELVMQQLR 369

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CycANP_524030.2 Cyclin_N 206..332 CDD:278560 32/127 (25%)
Cyclin_C 334..450 CDD:281044 25/128 (20%)
CCNI2NP_001274181.1 Cyclin_N <156..247 CDD:278560 24/90 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165146223
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5024
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
32.740

Return to query results.
Submit another query.