DRSC/TRiP Functional Genomics Resources

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Protein Alignment CycA and ccne1

DIOPT Version :9

Sequence 1:NP_524030.2 Gene:CycA / 39340 FlyBaseID:FBgn0000404 Length:491 Species:Drosophila melanogaster
Sequence 2:NP_001016328.1 Gene:ccne1 / 549082 XenbaseID:XB-GENE-972042 Length:408 Species:Xenopus tropicalis


Alignment Length:411 Identity:94/411 - (22%)
Similarity:163/411 - (39%) Gaps:99/411 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   102 YEDN---NDTQVAPSGKSLASLVDKENHDVKFGAGQKELVDYDLDSTPMSVTDVQSPMSVDRSIL 163
            |:|.   ::..:..|...|....:||.|:                         |:|.|...  .
 Frog    54 YQDRGPWSNEMICKSPHKLIPTPEKEEHE-------------------------QNPTSYPH--F 91

  Fly   164 GVIQSSDISVGTETGVSPTGRVKELPPRNDRQRFLEVVQYQMDILEYFRESEKKHRPKPLYMRRQ 228
            ..::.|.:|      |||..|   |...|           |.|:.......::.:.....:.::.
 Frog    92 ASLRFSPVS------VSPLPR---LGWAN-----------QDDVWRNMLNKDRTYLRDKNFFQKH 136

  Fly   229 KDISHNMRSILIDWLVEVSEEYKLDTETLYLSVFYLDRFL-SQMAVVRSKLQLVGTAAMYIAAKY 292
            ..:..|||:||:|||:||.|.|||..||.||...:.|||: :|..|::|:|||:|...::||||.
 Frog   137 PQLQPNMRAILLDWLMEVCEVYKLHRETFYLGQDFFDRFMATQKNVIKSRLQLIGITFLFIAAKL 201

  Fly   293 EEIYPPEVGEFVFLTDDSYTKAQVLRMEQVILKILSFDLCTPTAYVFINTYA-----------VL 346
            ||||||::.:|.|:||.:.|:.::..||.:|:|.|.:.|...|...:.|.:.           :|
 Frog   202 EEIYPPKLHQFAFITDGACTEDEITSMELIIMKDLDWCLSPMTVVSWFNVFLQVAYIRELQHFLL 266

  Fly   347 CDMPEKLKYMTLYISELSLME-------------GETYLQYLPSLMSSASVALARHILGMEMW-- 396
            ...|:::....:.:.:|.:::             ...|....|.|:...|......:.|...|  
 Frog   267 PQFPQEVYIQIVQLLDLCVLDICCLEYPYGVLAASALYHFSCPELVEKVSGFKLTELQGCIKWLV 331

  Fly   397 ----------TPRLEEITTYKLEDLKTVVLHLCHTHKTAKELNTQAMREKYNRDTYKKVAMMESV 451
                      ..:|:......:||:..:.:|........|....:|:.|:.||.:.....::...
 Frog   332 PFAMAIKDGGKSKLKFFKGVDIEDVHNIQMHTGCLELMEKVHINRALLEEQNRASPIPSGVLTPP 396

  Fly   452 EMSKDDFDQLCEAYNCKQKED 472
            :.:|            |||.|
 Frog   397 QSNK------------KQKSD 405

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CycANP_524030.2 Cyclin_N 206..332 CDD:278560 49/126 (39%)
Cyclin_C 334..450 CDD:281044 20/151 (13%)
ccne1NP_001016328.1 Cyclin_N 114..241 CDD:278560 49/126 (39%)
Cyclin_C <280..>340 CDD:281044 7/59 (12%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D993640at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

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