DRSC/TRiP Functional Genomics Resources

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Protein Alignment CycA and ccne2

DIOPT Version :9

Sequence 1:NP_524030.2 Gene:CycA / 39340 FlyBaseID:FBgn0000404 Length:491 Species:Drosophila melanogaster
Sequence 2:NP_001016267.1 Gene:ccne2 / 549021 XenbaseID:XB-GENE-923043 Length:397 Species:Xenopus tropicalis


Alignment Length:400 Identity:106/400 - (26%)
Similarity:183/400 - (45%) Gaps:66/400 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   103 EDNNDTQVAPSGKSLASLVDKENHDVKFGAGQ-KELVDYDLDSTPMSVTDVQSPMSVDRSILGVI 166
            :..||.|:|.:.|...|    |.....|...| .:..:|::......:|    ..:|...||...
 Frog    16 DTGNDCQLAVATKKRKS----EETSTTFECHQDAKRHNYEIQGCWSEIT----TGTVTPCILIET 72

  Fly   167 QSSDISVGTETGVSPTGRVK----------ELPPRNDRQRFLEVVQYQMDILEYFRESEKKHRPK 221
            ...::|:.|:.......|.|          ||...|.:..:::::.         :||...|..:
 Frog    73 PHKEMSISTDISQFSRYRFKNLFISRSPLPELSWGNSKDVWMKMIS---------KESRYVHSSR 128

  Fly   222 PLYMRRQKDISHNMRSILIDWLVEVSEEYKLDTETLYLSVFYLDRF-LSQMAVVRSKLQLVGTAA 285
              .::....::.:|||||:|||:||||.|.|..||.||:..:.||| |:|..|.:|.|||:|..|
 Frog   129 --LLQNHPTLNPDMRSILLDWLIEVSEVYTLHRETFYLAQDFFDRFMLTQTCVNKSMLQLIGVTA 191

  Fly   286 MYIAAKYEEIYPPEVGEFVFLTDDSYTKAQVLRMEQVILKILSFDLCTPTAYVFINTY---AVLC 347
            ::||:|.||||||::.||.::||.:.::..:|:||.::||.|.::|...||..::|.|   :.|.
 Frog   192 LFIASKLEEIYPPKLHEFAYVTDGACSEDDILQMELIMLKALKWELYPVTAIAWLNLYLQVSSLK 256

  Fly   348 DMPEKL--KY-MTLYISELSLME----GETYLQYLPSLMSSASVALARHILGMEMWTPRLEEITT 405
            |.|:.|  :| ...:|..:.|::    ..|.|.:...::::|::   .|....|:.|    :.|.
 Frog   257 DHPKLLLPQYSQEQFIHVVQLLDLCILHHTSLDFQYRILAAAAL---YHFTSTEVVT----KATG 314

  Fly   406 YKLEDLKTVVLHLCHTHKTAKELNTQAMREKYNRDTYKKVAM--MESVEMSKDDFDQLCEAYNCK 468
            ..:|.:...|      |..|...........:....:||||.  |.:::...:..|.|       
 Frog   315 LDMESIGECV------HWMAPFARVVKRSSPFKLKVFKKVAPEDMHNIQTHANYLDML------- 366

  Fly   469 QKEDEHQQPD 478
               |:.:.||
 Frog   367 ---DDVKVPD 373

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CycANP_524030.2 Cyclin_N 206..332 CDD:278560 52/126 (41%)
Cyclin_C 334..450 CDD:281044 27/127 (21%)
ccne2NP_001016267.1 Cyclin_N 111..237 CDD:365896 52/136 (38%)
Cyclin_C 240..359 CDD:367282 27/131 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D993640at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

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