Protein Alignment CycA and Ccno

DIOPT Version :9

• Sequence 1: NP_524030.2
• Gene: CycA / 39340
• FlyBaseID: FBgn0000404
• Length: 491
• Species: Drosophila melanogaster
• Sequence 2: XP_006232009.1
• Gene: Ccno / 499528
• RGDID: 1565217
• Length: 352
• Species: Rattus norvegicus
• Alignment Length: 304
• Identity: 81/304 - (26%)
• Similarity: 135/304 - (44%)
• Gaps: 44/304 - (14%)

  Fly   141 DLDSTPMSVTD-VQSP-MSVDRSILGVIQSSDISVGTETGVSPTGRVKELPPRNDRQRFLEVVQY 203
            ||..:|.|.:| ..|| :|..|....::.|:          .|...:       |.|.|.|   |
  Rat    59 DLFESPSSSSDGADSPAVSAVRDCSSLLSSA----------QPLTAL-------DLQTFRE---Y 103

  Fly   204 QMDILEYFRESEKKHRPKPLYMRRQKDISHNMRSILIDWLVEVSEEYKLDTETLYLSVFYLDRFL 268
            .....::.:..|....|:. .:.||..::...|..|:.||::|..::.|..|:|.|:|..|||||
  Rat   104 GQSCYDFRKAQENLFHPRE-SLARQPQVTAESRCKLLSWLLQVHRQFGLSFESLCLTVNTLDRFL 167

  Fly   269 SQMAVVRSKLQLVGTAAMYIAAKYEEIYPPEVGEFVFLTDDSYTKAQVLRMEQVILKILSFDLCT 333
            ....|.....||:|...:.||.|..|::||.:.:.:.|...::::.|:..:|.::|..|.|.|..
  Rat   168 LTTPVAADCFQLLGVTCLLIACKQVEVHPPRMKQLLALCGGAFSRQQLCNLECIVLHKLHFSLGA 232

  Fly   334 PTAYVFINTY------AVLCDMPEKLKYMTLY--ISELSLMEGETYLQYLPSLMSSASVALA--- 387
            ||...|:..:      |...::.|.|...||.  ::||||.: ..:..|.|||::...:|||
  Rat   233 PTINFFLEHFTHSRVEAGQVEVTEALAAQTLARGVAELSLTD-YAFTTYTPSLLAICCLALADRM 296

  Fly   388 -RHILGMEMWTPRLEEITTY----KLEDLKTV----VLHLCHTH 422
             ||...|::......|.|..    ||:.|.::    :.|:...|
  Rat   297 LRHQRLMDLRLGEHPEATLLDCLGKLQKLVSINSSSLTHMLPAH 340

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CycA	NP_524030.2	Cyclin_N	206..332	CDD:278560	35/125 (28%)
		Cyclin_C	334..450	CDD:281044	29/109 (27%)
Ccno	XP_006232009.1	Cyclin_N	108..231	CDD:278560	35/123 (28%)
		Cyclin_C	233..>298	CDD:281044	19/65 (29%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG5024
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	2	1.810