DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CycA and Ccnb1

DIOPT Version :9

Sequence 1:NP_524030.2 Gene:CycA / 39340 FlyBaseID:FBgn0000404 Length:491 Species:Drosophila melanogaster
Sequence 2:NP_758505.2 Gene:Ccnb1 / 268697 MGIID:88302 Length:430 Species:Mus musculus


Alignment Length:465 Identity:129/465 - (27%)
Similarity:210/465 - (45%) Gaps:92/465 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 NKENPGIKIPAGVKNTKQPLAVIGGKAEKNALAPRANFAVLNGNNNVPRPAGKVQVFRDVRNLNV 76
            |.||......||.|  :.|:.|..  |.|..|.||.....: ||........:|.:.|:.:.|..
Mouse    12 NAENKAKVSMAGAK--RVPVTVTA--ASKPGLRPRTALGDI-GNKVSEELQARVPLKREAKTLGT 71

  Fly    77 DE-NVEYGAKKSNVVPVVEQFKTFSVYEDNNDTQVA-PSGKSLASLVDKENHDVKFGAGQKELVD 139
            .: .|:...|....|||.|.           :.::| |..:.....|.:|.              
Mouse    72 GKGTVKALPKPVEKVPVCEP-----------EVELAEPEPEPELEHVREEK-------------- 111

  Fly   140 YDLDSTPMSVTDVQSPMSVDRS----------------ILGVIQSSDISVGTETGVSPTGRVKEL 188
              |...|:.| |..||..::.|                ||.|   ||  |..:.|..|.      
Mouse   112 --LSPEPILV-DNPSPSPMETSGCAPAEEYLCQAFSDVILAV---SD--VDADDGADPN------ 162

  Fly   189 PPRNDRQRFLEVVQYQMDILEYFRESEKKHRPKPLYMRRQKDISHNMRSILIDWLVEVSEEYKLD 253
                      ...:|..||..|.|:.|::...:|.|: :.::::.|||:||||||::|..:::|.
Mouse   163 ----------LCSEYVKDIYAYLRQLEEEQSVRPKYL-QGREVTGNMRAILIDWLIQVQMKFRLL 216

  Fly   254 TETLYLSVFYLDRFLSQMAVVRSKLQLVGTAAMYIAAKYEEIYPPEVGEFVFLTDDSYTKAQVLR 318
            .||:|::|..:|||:....|.:..|||||..||:||:||||:||||:|:|.|:|:::|||.|:.:
Mouse   217 QETMYMTVSIIDRFMQNSCVPKKMLQLVGVTAMFIASKYEEMYPPEIGDFAFVTNNTYTKHQIRQ 281

  Fly   319 MEQVILKILSFDLCTPTAYVFINTYAVLCDMPEKLKYMTLYISELSLMEGETYLQYLPSLMSSAS 383
            ||..||::|:|.|..|....|:...:.:.::..:...:..|:.|||:::.: .:.:.||.:::.:
Mouse   282 MEMKILRVLNFSLGRPLPLHFLRRASKVGEVDVEQHTLAKYLMELSMLDYD-MVHFAPSQIAAGA 345

  Fly   384 VALARHILGMEMWTPRLEEITTYKLEDLKTVVLHLCHT----------HKTAKELNTQAMREKYN 438
            ..||..||....|||.|:...:|..:.|..|:.||...          |.|.|        .||.
Mouse   346 FCLALKILDNGEWTPTLQHYLSYSEDSLLPVMQHLAKNVVMVNCGLTKHMTVK--------NKYA 402

  Fly   439 RDTYKKVAMM 448
            ...:.|::.:
Mouse   403 ASKHAKISTL 412

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CycANP_524030.2 Cyclin_N 206..332 CDD:278560 57/125 (46%)
Cyclin_C 334..450 CDD:281044 27/125 (22%)
Ccnb1NP_758505.2 Interaction with CDK2. /evidence=ECO:0000250 166..174 3/7 (43%)
Cyclin_N 170..295 CDD:278560 57/125 (46%)
Interaction with CDK2. /evidence=ECO:0000250 255..258 2/2 (100%)
Cyclin_C 297..415 CDD:281044 27/125 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167836322
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5024
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D993640at2759
OrthoFinder 1 1.000 - - FOG0000121
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100199
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X94
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
76.650

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