Protein Alignment CycA and Ccne1

DIOPT Version :9

• Sequence 1: NP_524030.2
• Gene: CycA / 39340
• FlyBaseID: FBgn0000404
• Length: 491
• Species: Drosophila melanogaster
• Sequence 2: NP_001094291.1
• Gene: Ccne1 / 25729
• RGDID: 2294
• Length: 411
• Species: Rattus norvegicus
• Alignment Length: 441
• Identity: 104/441 - (23%)
• Similarity: 189/441 - (42%)
• Gaps: 96/441 - (21%)

  Fly    77 DENVEYGAKKSNVVPVVEQFKTFSVYEDNNDTQVAPSGKSLASLVDKENHDVKFGAGQKELVDYD 141
            |.:|....:|:||          :|:..:.|.::|...|::.|              |.....:|
  Rat    23 DLSVRSRKRKANV----------AVFLQDPDEEIAKIDKTVKS--------------QDSSQPWD 63

  Fly   142 LDST---PMSVTDVQSPMSVDRSILGVIQSSDISVGTETGVSPTGRVKELPPRNDRQRFLEVVQY 203
            .||.   |.|.  :.:|...:.:.|..         .:|...|.   |..|||...   |.|:.:
  Rat    64 DDSACVDPCSF--IPTPNKEEDNELEY---------PKTAFQPR---KIRPPRASP---LPVLNW 111

  Fly   204 --QMDILEYFRESEKKHRPKPLYMRRQKDISHNMRSILIDWLVEVSEEYKLDTETLYLSVFYLDR 266
              :.::.......||.:.....:::|...:...||::|:|||:||.|.|||..||.||:..:.||
  Rat   112 GNREEVWRIMLNKEKTYLRDEHFLQRHPLLQARMRAVLLDWLMEVCEVYKLHRETFYLAQDFFDR 176

  Fly   267 FL-SQMAVVRSKLQLVGTAAMYIAAKYEEIYPPEVGEFVFLTDDSYTKAQVLRMEQVILKILSFD 330
            :: ||..::::.|||:|.:|::||:|.||||||::.:|.::||.:.:..::|.||.:::|.|.:.
  Rat   177 YMASQQNIIKTLLQLIGISALFIASKLEEIYPPKLHQFAYVTDGACSGDEILTMELMMMKALKWR 241

  Fly   331 LCTPTAYVFINTY---AVLCD-----MPEKLKYMTLYISEL--------SLMEGETYLQYLPSLM 379
            |...|...::|.|   |.:.|     ||:..:.:.:.|:||        ..:|....:....:|.
  Rat   242 LSPLTIVSWLNVYVQVAYVNDTGEVLMPQYPQQVFVQIAELLDLCVLDVGCLEFPYGVLAASALY 306

  Fly   380 SSASVALARHILG--------------------MEMWTPRLEEITTYKLEDLKTVVLHLCHTHKT 424
            ..:|:.|.:.:.|                    .||.:.:|:......:||     .|...||..
  Rat   307 HFSSLELMQKVSGYQWCDIEKCVKWMVPFAMVIREMGSSKLKHFRGVPMED-----SHNIQTHTN 366

  Fly   425 AKELNTQAMREKYNRDTYKKVAMMESVEMSKDDFDQLCEAYNCKQKEDEHQ 475
            :.:|..:|..        ||..:.|...:|......|...::.|::..|.:
  Rat   367 SLDLLDKAQA--------KKAILSEQNRISPPPSGVLTPPHSSKKQSSEQE 409

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CycA	NP_524030.2	Cyclin_N	206..332	CDD:278560	45/126 (36%)
		Cyclin_C	334..450	CDD:281044	27/151 (18%)
Ccne1	NP_001094291.1	Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	1..44		6/30 (20%)
		CYCLIN_SF	104..240	CDD:424085	47/138 (34%)
		CYCLIN_CCNE1_rpt2	244..357	CDD:410284	18/112 (16%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	381..411		5/29 (17%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG5024
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D993640at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	4	3.820