DRSC/TRiP Functional Genomics Resources

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Protein Alignment CycA and cig1

DIOPT Version :10

Sequence 1:NP_524030.2 Gene:CycA / 39340 FlyBaseID:FBgn0000404 Length:491 Species:Drosophila melanogaster
Sequence 2:NP_588110.2 Gene:cig1 / 2539433 PomBaseID:SPCC4E9.02 Length:415 Species:Schizosaccharomyces pombe


Alignment Length:431 Identity:105/431 - (24%)
Similarity:186/431 - (43%) Gaps:91/431 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    68 FRDVRNLNVDENVEYGAKKSNV------------VPVVEQFKTFSVYEDNNDTQVAPSGKSLASL 120
            |:|...|..|.  .|..|||::            |..:.|....::.|.||::.::      :|.
pombe    13 FQDENQLQKDH--IYVKKKSHIKLNTGVRAPFKAVDNINQQDEPTLIEGNNESSIS------SST 69

  Fly   121 VDKENHDVKFGAGQKELVDYDLDSTPMSVTDVQSPMSVDRSILGVIQSSDISVGTETGVSPTG-- 183
            .|....|..: ..:.|:.:..:.|||.|:.|..            :::.:.|.....|:...|  
pombe    70 GDTFEEDFAY-QDKVEIEERSIRSTPKSIGDDD------------LENREGSFDAPEGILTHGKH 121

  Fly   184 RVKELP--PRNDRQRFLE--------------------VVQYQMDILEYFRESEKKHRPKPLYMR 226
            |:..:|  .:.|.....|                    |..|..:|..|.:..|:|..|.|.||.
pombe   122 RLPTIPEWTKEDLAALSEAAARLQANPSPEDIETDPSMVPDYDPEIFHYMQSLERKLAPPPNYMS 186

  Fly   227 RQKDISHNMRSILIDWLVEVSEEYKLDTETLYLSVFYLDRFLSQMAVVRSKLQLVGTAAMYIAAK 291
            .|::|....|.:|:||:|:|...::|..|||:|:|..:|||||...|...|:||||.:|:.||.|
pombe   187 VQQEIDWVTRHMLVDWIVQVQIHFRLLPETLFLAVNLIDRFLSIKVVSLQKVQLVGLSALLIACK 251

  Fly   292 YEEIYPPEVGEFVFLTDDSYTKAQVLRMEQVILKILSFDLCTPTAYVFINTYAVLCDMPEKLKYM 356
            ||||:||.:..|..:....:|..:::|.|:.:|.:|.||:..|....|:...:........::.:
pombe   252 YEEIHPPSIYNFAHVVQGIFTVDEIIRAERYMLMLLDFDISWPGPMSFLRRISRADSYDHDIRML 316

  Fly   357 TLYISELSLMEGETYLQYLPSLMSSASVALARHILGMEMWTPRLEEITTYKLEDLKTVVLHLCHT 421
            ..|:.|::||: |.::....|.:::.:..|:..:||...|||                 .|:.::
pombe   317 AKYLQEVTLMD-EIFIGAHISFIAATAYYLSMQMLGHLDWTP-----------------CHVYYS 363

  Fly   422 HKTAKEL----------------NTQAMREKYNRDTYKKVA 446
            ..||::|                :..|:..||:.:..|:|:
pombe   364 GYTARQLKPCAIIIMECLVDAPNHHNAIYRKYSENRMKRVS 404

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CycANP_524030.2 CYCLIN_CCNA_rpt1 202..329 CDD:410208 50/126 (40%)
Cyclin_C 334..450 CDD:397230 23/129 (18%)
cig1NP_588110.2 COG5024 1..414 CDD:227357 105/431 (24%)

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