DRSC/TRiP Functional Genomics Resources

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Protein Alignment CycA and Ccnb3

DIOPT Version :10

Sequence 1:NP_524030.2 Gene:CycA / 39340 FlyBaseID:FBgn0000404 Length:491 Species:Drosophila melanogaster
Sequence 2:NP_898836.2 Gene:Ccnb3 / 209091 MGIID:2183443 Length:1396 Species:Mus musculus


Alignment Length:429 Identity:123/429 - (28%)
Similarity:202/429 - (47%) Gaps:94/429 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    68 FRDVRNLNVDENVEYGAKKSNVVPVVEQFKTFSVYED---------------NNDTQVAPSGKSL 117
            |.|::|.          :::.:|...|.||:|.|:|:               :|.:.:.||.|:.
Mouse  1029 FTDLQNF----------EETKIVDEEEFFKSFLVFENKNSPNMSSNAFESRTDNSSAIMPSSKAF 1083

  Fly   118 ASLVDKENHDVK--------FGAGQKEL-VDYDLDSTPMSVTDVQSPMSVDRSILGVIQSSDISV 173
             :.|:..|..|.        .||.:.|: :..|.||......:.|.|      :|..|       
Mouse  1084 -NPVENSNPYVSSSKSFKSTLGAKETEITIQDDSDSLERIEKEGQDP------LLNTI------- 1134

  Fly   174 GTETGVSPTGRVKELPPRNDRQRFLEVVQYQMDILEYFRESEKKHRPKPLYMRRQKDISHNMRSI 238
                                         |..|:..|.:|.|:|...:. ||..|.:::.:||:|
Mouse  1135 -----------------------------YAKDVFNYLKEREEKFLVQK-YMDGQMELTSDMRAI 1169

  Fly   239 LIDWLVEVSEEYKLDTETLYLSVFYLDRFLSQMAVVRSKLQLVGTAAMYIAAKYEEIYPPEVGEF 303
            |:|||||:...:::..|||||:|..:|.:|.:....::.|||:|:....||||:||.|||.:.||
Mouse  1170 LVDWLVEIQGSFQMTHETLYLAVKIMDLYLMKAQCKKNHLQLLGSTTYMIAAKFEESYPPSLSEF 1234

  Fly   304 VFLTDDSYTKAQVLRMEQVILKILSFDLCTPTAYVFINTYAVLCDMPEKLKYMTLYISELSLMEG 368
            :|:.:|.|.|:.::.:|..||:.|:||:..||||.|:..||.......|...::.:|.|::|.|.
Mouse  1235 LFICEDMYEKSDMVSLESSILQTLNFDINIPTAYNFLRRYASCIHASMKTLTLSRFICEMTLQEY 1299

  Fly   369 ETYLQYLPSLMSSASVALARHILGMEMWTPRLEEITTYKLEDLKTVVLHLCH-----THKTAKEL 428
            | |::..||.:::||..||.::..:....|.||..|.||:.:|..:|..|.|     :|...|. 
Mouse  1300 E-YIEERPSKLAAASFILALYMRNLSNCVPTLEYFTGYKMAELHILVRKLNHLLNFRSHSILKN- 1362

  Fly   429 NTQAMREKYNRDTYKKVAMMESVEMSKDDFDQLCEAYNC 467
                :.|||:.:||.:||.:.  .:||.|.:.|   .||
Mouse  1363 ----VFEKYSEETYFEVAKIP--PLSKQDLENL---LNC 1392

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CycANP_524030.2 CYCLIN_CCNA_rpt1 202..329 CDD:410208 49/126 (39%)
Cyclin_C 334..450 CDD:397230 39/120 (33%)
Ccnb3NP_898836.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..64
D-box 54..62
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 259..398
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 477..500
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 775..796
CYCLIN_SF 1123..1261 CDD:477360 53/180 (29%)
CYCLIN_SF 1265..1379 CDD:477360 39/119 (33%)
Blue background indicates that the domain is not in the aligned region.

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