DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CycA and T24A6.1

DIOPT Version :10

Sequence 1:NP_524030.2 Gene:CycA / 39340 FlyBaseID:FBgn0000404 Length:491 Species:Drosophila melanogaster
Sequence 2:NP_001309661.1 Gene:T24A6.1 / 188821 WormBaseID:WBGene00020744 Length:91 Species:Caenorhabditis elegans


Alignment Length:101 Identity:24/101 - (23%)
Similarity:47/101 - (46%) Gaps:14/101 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly   277 KLQLVGTAAMYIAAKYEEIYPPEVGEFVFLTDDSYTKAQVLRMEQVILKILSFDLCTPTAYVFIN 341
            :.:|||..:|.| .|..|..|           ::.|...:|.||:.::....|.:..||.....:
 Worm     2 RFKLVGMTSMMI-KKIRENLP-----------NNPTVPDILLMERFLIGKFEFVVAKPTPSWLGS 54

  Fly   342 TYAVLCDMPEKLKYMTLYISELSLMEGETYLQYLPS 377
            .:|...::.:|:: ..:.:.|||.::.. :|:|.||
 Worm    55 CFAKRINLTKKMR-NDVKLLELSPIDAH-FLRYRPS 88

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CycANP_524030.2 CYCLIN_CCNA_rpt1 202..329 CDD:410208 12/51 (24%)
Cyclin_C 334..450 CDD:397230 11/44 (25%)
T24A6.1NP_001309661.1 CYCLIN_SF 47..>91 CDD:477360 11/44 (25%)

Return to query results.
Submit another query.