Protein Alignment CycA and cyb-3

DIOPT Version :9

• Sequence 1: NP_524030.2
• Gene: CycA / 39340
• FlyBaseID: FBgn0000404
• Length: 491
• Species: Drosophila melanogaster
• Sequence 2: NP_506825.4
• Gene: cyb-3 / 180040
• WormBaseID: WBGene00000868
• Length: 385
• Species: Caenorhabditis elegans
• Alignment Length: 309
• Identity: 87/309 - (28%)
• Similarity: 160/309 - (51%)
• Gaps: 42/309 - (13%)

  Fly   178 GVSPTGR--VKELPPRNDRQRFLE-----------------VVQYQMDILEYFRESEKKHRPKPL 223
            |.|.|.|  |:.|||:  :.|:::                 :..|...|.:|:|..|...|.:.
 Worm    70 GKSRTSRRDVENLPPQ--KSRYVDPCPHYDYDLEEAGNPDSISDYAQGIFDYYRHREVHFRVRK- 131

  Fly   224 YMRRQKDISHNMRSILIDWLVEVSEEYKLDTETLYLSVFYLDRFLSQMA-VVRSKLQLVGTAAMY 287
            |:.:..::....|:|||||:||:.|.::|:.||||.:|...|.:|.:.. |.::.:|.:...|::
 Worm   132 YLHKHPEVDVKTRAILIDWMVEIQETFELNHETLYNAVKLTDMYLCKTKNVDKNTIQKLACVAIF 196

  Fly   288 IAAKYEEIYPPEVGEFVFLTDDSYTKAQVLRMEQVILKILSFDLCTPTAYVFINTYAVLCDMPEK 352
            |||||:|..||.|.:.::|:.|.:::.::|.||:.:...:.:||.:|.:|.::..:..:|.:..|
 Worm   197 IAAKYDERSPPLVDDLIYLSGDRFSRDELLAMERELFATVGYDLGSPLSYRYLRRFGRVCRVDMK 261

  Fly   353 LKYMTLYISELSLMEGETYLQYLPSLMSSASVALARHILGMEM--------WTPRLEEITTYKLE 409
            ...|..:|.|.|||      .|..:::|.:.:|.|..:|.|.|        |.|.||:.:.:..|
 Worm   262 TLTMGRFILETSLM------VYEYAMVSQSRLAAAAFVLAMRMLDKNNEYEWNPVLEKYSGFTGE 320

  Fly   410 DLKTVVLHLCHTHKTAKELNTQ--AMREKYNRDTYKKVAMMESVEMSKD 456
            ::..:|.|:.|....:|:...|  ::|:||:.:.:..||   |:.|..|
 Worm   321 EVMPLVEHMNHILHFSKDKWAQLTSVRQKYSHEVFFHVA---SIPMLPD 366

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CycA	NP_524030.2	Cyclin_N	206..332	CDD:278560	41/126 (33%)
		Cyclin_C	334..450	CDD:281044	32/125 (26%)
cyb-3	NP_506825.4	Cyclin_N	116..241	CDD:278560	41/125 (33%)
		Cyclin_C	243..364	CDD:281044	33/129 (26%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D993640at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	1	1.000	-	-		X94
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	3	2.920