Protein Alignment CycA and Ccnd1

DIOPT Version :9

• Sequence 1: NP_524030.2
• Gene: CycA / 39340
• FlyBaseID: FBgn0000404
• Length: 491
• Species: Drosophila melanogaster
• Sequence 2: NP_001366177.1
• Gene: Ccnd1 / 12443
• MGIID: 88313
• Length: 317
• Species: Mus musculus
• Alignment Length: 218
• Identity: 62/218 - (28%)
• Similarity: 112/218 - (51%)
• Gaps: 32/218 - (14%)

  Fly   192 NDRQRFLEVVQYQMDILEYFRESEKKHRPKPLYMR-RQKDISHNMRSILIDWLVEVSEEYKLDTE 255
            |||            :|....::|:...|...|.: .||:|..:||.|:..|::||.||.|.:.|
Mouse    24 NDR------------VLRAMLKTEETCAPSVSYFKCVQKEIVPSMRKIVATWMLEVCEEQKCEEE 76

  Fly   256 TLYLSVFYLDRFLSQMAVVRSKLQLVGTAAMYIAAKYEEIYPPEVGEFVFLTDDSYTKAQVLRME 320
            ...|::.|||||||...:.:|:|||:|...|::|:|.:|..|....:....||:|....::|:||
Mouse    77 VFPLAMNYLDRFLSLEPLKKSRLQLLGATCMFVASKMKETIPLTAEKLCIYTDNSIRPEELLQME 141

  Fly   321 QVILKILSFDLCTPTAYVFINTYAVLCDMPEK-------LKYMTLYISELSLMEGETYLQYL--- 375
            .:::..|.::|...|.:.||..:  |..|||.       .|:...:::..:     |.::::
Mouse   142 LLLVNKLKWNLAAMTPHDFIEHF--LSKMPEADENKQTIRKHAQTFVALCA-----TDVKFISNP 199

  Fly   376 PSLMSSASVALARHILGMEMWTP 398
            ||::::.||..|  :.|:.:.:|
Mouse   200 PSMVAAGSVVAA--MQGLNLGSP 220

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CycA	NP_524030.2	Cyclin_N	206..332	CDD:278560	42/126 (33%)
		Cyclin_C	334..450	CDD:281044	16/75 (21%)
Ccnd1	NP_001366177.1	CYCLIN_CCND1_rpt1	3..151	CDD:410276	45/138 (33%)
		CYCLIN_CCND1_rpt2	156..287	CDD:410279	16/74 (22%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C167836325
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	2	1.840