DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CycA and Ccna1

DIOPT Version :9

Sequence 1:NP_524030.2 Gene:CycA / 39340 FlyBaseID:FBgn0000404 Length:491 Species:Drosophila melanogaster
Sequence 2:NP_001292150.1 Gene:Ccna1 / 12427 MGIID:108042 Length:421 Species:Mus musculus


Alignment Length:421 Identity:162/421 - (38%)
Similarity:224/421 - (53%) Gaps:61/421 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    46 RANFAVLNGNNNVPRPAGKVQVFRDVRNLNVDENVEYGAKKSNVVPVVEQFKTFSVYEDNNDTQV 110
            |....||..|....|..|  |....:|..:..|||...|.|             .|..|:...:.
Mouse    37 RTVLGVLTENEQYRRTCG--QEITAIRCFSGSENVFPAAGK-------------KVLSDHGVNEP 86

  Fly   111 APSGKSLASLVDKENHDVKFGAGQKELV---DYDLDSTPMSVTDVQ--------SPMSVDRSILG 164
            |..|..: .:.|.|..|....:|::.::   .|::| |.|..:|:.        |||.||     
Mouse    87 AKRGFDI-YMDDPEQGDRDTCSGKEGIIFEDVYEVD-TSMLKSDLHFLLDFNTVSPMLVD----- 144

  Fly   165 VIQSSDISVGTETGVSPTGRVKELPPRNDRQRFLEVVQYQMDILEYFRESEKKHRPKPLYMRRQK 229
                            ||...:.....:.....:.|.:|..:|..|.||:|.:||||..|||:|.
Mouse   145 ----------------PTTHAQSEEATDFGSDVINVTEYAEEIHRYLREAEVRHRPKAHYMRKQP 193

  Fly   230 DISHNMRSILIDWLVEVSEEYKLDTETLYLSVFYLDRFLSQMAVVRSKLQLVGTAAMYIAAKYEE 294
            ||:..||:||:||||||.|||||.||||||:|.:||||||.|:|:|.|||||||||:.:|:||||
Mouse   194 DITEGMRAILVDWLVEVGEEYKLRTETLYLAVNFLDRFLSCMSVLRGKLQLVGTAAILLASKYEE 258

  Fly   295 IYPPEVGEFVFLTDDSYTKAQVLRMEQVILKILSFDLCTPTAYVFINTY---AVLCDMPEKLKYM 356
            ||||:|.|||::|||:|||.|:||||.::||:|:|||..||...|:..|   ..:|...|.|   
Mouse   259 IYPPDVDEFVYITDDTYTKRQLLRMEHLLLKVLAFDLTVPTTNQFLLQYLRRQGVCIRTENL--- 320

  Fly   357 TLYISELSLMEGETYLQYLPSLMSSASVALARHILGMEMWTPRLEEITTYKLEDLKTVVLHLCHT 421
            ..|::||||:|.:.:|:|||||:::|:..||.:|:....|...|...|.|.|.:   :|..|...
Mouse   321 AKYVAELSLLEADPFLKYLPSLVAAAAYCLANYIVNRHFWPETLAAFTGYSLNE---IVPCLSEL 382

  Fly   422 HKTAKEL---NTQAMREKYNRDTYKKVAMME 449
            ||....:   ..||:||||....|..|::||
Mouse   383 HKACLSIPHRPQQAIREKYKASKYLHVSLME 413

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CycANP_524030.2 Cyclin_N 206..332 CDD:278560 84/125 (67%)
Cyclin_C 334..450 CDD:281044 42/122 (34%)
Ccna1NP_001292150.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..21
Cyclin_N2 27..>101 CDD:406812 19/79 (24%)
CYCLIN_CCNA1_rpt1 132..294 CDD:410263 91/182 (50%)
CYCLIN_CCNA1_rpt2 298..420 CDD:410266 42/122 (34%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 179 1.000 Domainoid score I3516
eggNOG 1 0.900 - - E1_COG5024
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 254 1.000 Inparanoid score I3178
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D520533at33208
OrthoFinder 1 1.000 - - FOG0000121
OrthoInspector 1 1.000 - - otm42820
orthoMCL 1 0.900 - - OOG6_100199
Panther 1 1.100 - - LDO PTHR10177
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X94
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1312.830

Return to query results.
Submit another query.