DRSC/TRiP Functional Genomics Resources

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Protein Alignment CycA and LOC100487999

DIOPT Version :9

Sequence 1:NP_524030.2 Gene:CycA / 39340 FlyBaseID:FBgn0000404 Length:491 Species:Drosophila melanogaster
Sequence 2:XP_002935739.2 Gene:LOC100487999 / 100487999 -ID:- Length:365 Species:Xenopus tropicalis


Alignment Length:232 Identity:62/232 - (26%)
Similarity:105/232 - (45%) Gaps:22/232 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly   202 QYQMDILEYFRESEKKHRPKPLYMRRQKDISHNMRSILIDWLVEVSEEYKLDTETLYLSVFYLDR 266
            :|..|...:.:..||...|.. ::..|.::.......:|:.|::|...:.||..||.|||.||.|
 Frog    62 EYGEDAYLFNKRLEKDFSPLD-FLANQHEVDPTNWEEVINILIKVQRHFSLDFSTLCLSVNYLAR 125

  Fly   267 FLSQMAVVRSKLQLVGTAAMYIAAKYEEIYPPEVGEFVFLTDD-SYTKAQVLRMEQVILKILSFD 330
            ::||..:..:.|:.:|...:|:|.|......|...:|:.|..| :||.|.:..:|:.::..|.:.
 Frog   126 YISQRPLKATILKPLGATCLYLATKIMGRKRPSAEDFLELFGDANYTPAYIAYVEKNLMCQLDYR 190

  Fly   331 LCTPTAYVFINTYAVLCDMPEKLK-YMTLYISELSLMEGETYL--------QYLPSLMSSASVAL 386
            |..||...|:..::::....||.. .:|...:.|:...|...|        ||.|||::...:..
 Frog   191 LQGPTIDFFLEHFSLIRASSEKCSGIITRAANALTAARGIAALAMTQYGFHQYAPSLLAQCCLKA 255

  Fly   387 ARHILGMEMWTPRLEEITTYK-------LEDLKTVVL 416
            |.:|.|..  |...||...|.       ||  ||::|
 Frog   256 ADNIFGYN--TTNEEEPRDYPAHLMQECLE--KTLLL 288

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CycANP_524030.2 Cyclin_N 206..332 CDD:278560 34/126 (27%)
Cyclin_C 334..450 CDD:281044 26/99 (26%)
LOC100487999XP_002935739.2 Cyclin_N 67..191 CDD:278560 33/124 (27%)
CYCLIN 194..>249 CDD:294043 14/54 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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