Protein Alignment CycA and LOC100364016

DIOPT Version :9

• Sequence 1: NP_524030.2
• Gene: CycA / 39340
• FlyBaseID: FBgn0000404
• Length: 491
• Species: Drosophila melanogaster
• Sequence 2: XP_008756873.2
• Gene: LOC100364016 / 100364016
• RGDID: 2321841
• Length: 366
• Species: Rattus norvegicus
• Alignment Length: 245
• Identity: 81/245 - (33%)
• Similarity: 140/245 - (57%)
• Gaps: 14/245 - (5%)

  Fly   203 YQMDILEYFRESEKKHRPKPLYMRRQKDISHNMRSILIDWLVEVSEEYKLDTETLYLSVFYLDRF 267
            |..||.:|.|:.|......|.:: ..:||:..||:||:||||:|..:::|..||||:.:..:|||
  Rat   134 YVKDIYQYLRQLEALQSINPHFL-DGRDINGRMRAILVDWLVQVHSKFRLLQETLYMCIAIMDRF 197

  Fly   268 LSQMAVVRSKLQLVGTAAMYIAAKYEEIYPPEVGEFVFLTDDSYTKAQVLRMEQVILKILSFDLC 332
            |....|.|.||||||..|:.:|:||||::.|.:.:||::||::||.:|:..||.:|||.|.|:|.
  Rat   198 LQAQPVCRKKLQLVGITALLLASKYEEMFSPNIEDFVYITDNAYTSSQIREMETLILKELKFELG 262

  Fly   333 TPTAYVFINTYAVLCDMPEKLKYMTLYISELSLMEGETYLQYLPSLMSSASVALARHILGMEMWT 397
            .|....|:...:...::..:...:..|:.||:|::.: .:.|.||.:::|:..|::.:||...|.
  Rat   263 RPLPLHFLRRASKAGEVDVEQHTLAKYLMELTLVDYD-MVHYHPSQVAAAASCLSQKVLGQGKWN 326

  Fly   398 PRLEEITTYKLEDLKTVVLHLCHTHKTAKELNTQAMREKYNRDTYKKVAM 447
            .:.:..|.|...::..|:.|:      ||.:      .|.|.:..|.:|:
  Rat   327 LKQQYYTGYMESEILEVMQHM------AKNV------VKVNENLTKFIAV 364

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CycA	NP_524030.2	Cyclin_N	206..332	CDD:278560	55/125 (44%)
		Cyclin_C	334..450	CDD:281044	24/114 (21%)
LOC100364016	XP_008756873.2	None

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D993640at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	1.010