DRSC/TRiP Functional Genomics Resources

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Protein Alignment RpL10Ab and AT1G08360

DIOPT Version :9

Sequence 1:NP_648514.1 Gene:RpL10Ab / 39338 FlyBaseID:FBgn0036213 Length:217 Species:Drosophila melanogaster
Sequence 2:NP_563813.2 Gene:AT1G08360 / 837356 AraportID:AT1G08360 Length:216 Species:Arabidopsis thaliana


Alignment Length:215 Identity:145/215 - (67%)
Similarity:180/215 - (83%) Gaps:0/215 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 SKVSRDTLYEGVNGLLEASAKKKRGFLETVELQIGLKNYDPQKDKRFSGTVKLKHIPRPKMKVCI 67
            ||:..:.:.|.:..:...|..|||.|:||:|||||||||||||||||||:|||.||||||||:|:
plant     2 SKLQSEAVREAITTITGKSEAKKRNFVETIELQIGLKNYDPQKDKRFSGSVKLPHIPRPKMKICM 66

  Fly    68 LGDQQHCDEAKANNVDFMDAEALKKLNKNKKLVKKLAKSYDAFLASESLIKQIPRLLGPGLNKAG 132
            |||.||.:||:...::.||.|:||||||||||||||||.|.|||||||:||||||||||||||||
plant    67 LGDAQHVEEAEKMGLENMDVESLKKLNKNKKLVKKLAKKYHAFLASESVIKQIPRLLGPGLNKAG 131

  Fly   133 KFPALLSHQESMIGKIEEVKSTIKFQMKKVLCLSVAVGHVGMKSDELAQNVNLSINFLVSLLKKN 197
            |||.|:|||||:..|:.|.|:|:|||:|||||:.||||::.|:..::.|||.:|:||||||||||
plant   132 KFPTLVSHQESLESKVNETKATVKFQLKKVLCMGVAVGNLSMEEKQIFQNVQMSVNFLVSLLKKN 196

  Fly   198 WQNVRSLHVKSSMGPPQRLY 217
            |||||.|::||:||||||::
plant   197 WQNVRCLYLKSTMGPPQRIF 216

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RpL10AbNP_648514.1 Ribosomal_L1 3..217 CDD:412308 145/213 (68%)
AT1G08360NP_563813.2 Ribosomal_L1 1..216 CDD:412308 145/213 (68%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 294 1.000 Domainoid score I353
eggNOG 1 0.900 - - E1_COG0081
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H68543
Inparanoid 1 1.050 309 1.000 Inparanoid score I743
OMA 1 1.010 - - QHG62172
OrthoDB 1 1.010 - - D1172076at2759
OrthoFinder 1 1.000 - - FOG0001990
OrthoInspector 1 1.000 - - otm3379
orthoMCL 1 0.900 - - OOG6_100869
Panther 1 1.100 - - O PTHR23105
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X1303
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1514.840

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