DRSC/TRiP Functional Genomics Resources

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Protein Alignment RpL10Ab and AT5G22440

DIOPT Version :10

Sequence 1:NP_648514.1 Gene:RpL10Ab / 39338 FlyBaseID:FBgn0036213 Length:217 Species:Drosophila melanogaster
Sequence 2:NP_197636.1 Gene:AT5G22440 / 832305 AraportID:AT5G22440 Length:217 Species:Arabidopsis thaliana


Alignment Length:216 Identity:141/216 - (65%)
Similarity:178/216 - (82%) Gaps:1/216 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 SKVSRDTLYEGVNGLL-EASAKKKRGFLETVELQIGLKNYDPQKDKRFSGTVKLKHIPRPKMKVC 66
            ||:..:.:.|.::.:: .....|.|.|.||:|||||||||||||||||||:|||.|:||||||:|
plant     2 SKLQSEAVREAISSIITHCKETKPRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHVPRPKMKIC 66

  Fly    67 ILGDQQHCDEAKANNVDFMDAEALKKLNKNKKLVKKLAKSYDAFLASESLIKQIPRLLGPGLNKA 131
            :|||.||.:||:...::.||.||||||||||||||||||.:.|||||||:|||||||||||||||
plant    67 MLGDAQHVEEAEKIGLESMDVEALKKLNKNKKLVKKLAKKFHAFLASESVIKQIPRLLGPGLNKA 131

  Fly   132 GKFPALLSHQESMIGKIEEVKSTIKFQMKKVLCLSVAVGHVGMKSDELAQNVNLSINFLVSLLKK 196
            ||||.|:|||||:..|:.|.|:|:|||:|||||:.||||::.|:..::.|||.:|:|||||||||
plant   132 GKFPTLVSHQESLESKVNETKATVKFQLKKVLCMGVAVGNLSMEEKQIFQNVQMSVNFLVSLLKK 196

  Fly   197 NWQNVRSLHVKSSMGPPQRLY 217
            ||||||.|::||:||||.|::
plant   197 NWQNVRCLYLKSTMGPPNRVF 217

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RpL10AbNP_648514.1 Ribosomal_L1 3..217 CDD:469720 141/214 (66%)
AT5G22440NP_197636.1 Ribosomal_L1 1..217 CDD:469720 141/214 (66%)

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