DRSC/TRiP Functional Genomics Resources

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Protein Alignment RpL10Ab and mrpl1

DIOPT Version :9

Sequence 1:NP_648514.1 Gene:RpL10Ab / 39338 FlyBaseID:FBgn0036213 Length:217 Species:Drosophila melanogaster
Sequence 2:NP_001191062.1 Gene:mrpl1 / 553284 ZFINID:ZDB-GENE-060526-311 Length:316 Species:Danio rerio


Alignment Length:135 Identity:29/135 - (21%)
Similarity:48/135 - (35%) Gaps:37/135 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 ASAKKKRGFLETVELQI----------------GLKNYDPQKDKRFSGTVKLKHIPRPKMKVCIL 68
            |:.|||....|.|:.::                ||..:.|..|     ...:::.|||..::.:.
Zfish    44 AATKKKEKKEEAVKEKVVKERKIIDDKDRHKPFGLTAWAPVDD-----VYMVRYYPRPLYELTVA 103

  Fly    69 GDQ----QHCDEAKANNVDFMDAEALKKLNKNKKLVKKLAKSYDAFLASESLIKQIPRLLGPGLN 129
            .|.    |..|.:..|...:::.....||.|.:||        |.|:.:..|    |......:|
Zfish   104 IDMLKSFQKLDFSAENQPIYINLRLNMKLEKKRKL--------DPFVRTIHL----PHPFKSDIN 156

  Fly   130 KAGKF 134
            |...|
Zfish   157 KVVVF 161

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RpL10AbNP_648514.1 Ribosomal_L1 3..217 CDD:412308 29/135 (21%)
mrpl1NP_001191062.1 Ribosomal_L1 98..241 CDD:294228 16/76 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0081
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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