DRSC/TRiP Functional Genomics Resources

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Protein Alignment RpL10Ab and mRpL1

DIOPT Version :10

Sequence 1:NP_648514.1 Gene:RpL10Ab / 39338 FlyBaseID:FBgn0036213 Length:217 Species:Drosophila melanogaster
Sequence 2:NP_524275.1 Gene:mRpL1 / 40980 FlyBaseID:FBgn0037566 Length:354 Species:Drosophila melanogaster


Alignment Length:188 Identity:45/188 - (23%)
Similarity:73/188 - (38%) Gaps:40/188 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    32 VELQIGLKNYDPQKDKRF-SGTVKLKHIPR-----PKMKVCILGDQQHCDEAKANNVDFMDAEAL 90
            :.|.|.| |...:|..|| ....::..||.     .:.|:.:.        .|.||......||.
  Fly   122 LNLDIEL-NMQAEKITRFVDNFQRMAMIPHKFDHGEERKIIVF--------TKGNNEVLEAREAG 177

  Fly    91 KKLNKNKKLVKK------LAKSYDAFLASESLIKQIPRLLGPGLNKAGKFPALLSHQESMIGKIE 149
            ..|....:|:|.      |...|...:|..:::.::..|  .||.|. |||...|  |::...:.
  Fly   178 ASLVGGVELIKDITSGELLLSDYQYVIAHPNILAELVAL--RGLMKR-KFPNPKS--ETLGTNLA 237

  Fly   150 EVKSTIKFQMKKVLCLSVAVGHVGMKSDELAQNVNL---SINFLVSLLKKNWQNVRSL 204
            |:  .:||        |..:.:...| ||..||..|   |:..|...::|..:|::.|
  Fly   238 EM--IVKF--------SSGISYSAAK-DEYQQNFGLITASVGTLDMDVQKLEENIKFL 284

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RpL10AbNP_648514.1 Ribosomal_L1 3..217 CDD:469720 45/188 (24%)
mRpL1NP_524275.1 rplA_mito 97..246 CDD:273480 34/147 (23%)

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