DRSC/TRiP Functional Genomics Resources

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Protein Alignment RpL10Ab and RGD1566137

DIOPT Version :9

Sequence 1:NP_648514.1 Gene:RpL10Ab / 39338 FlyBaseID:FBgn0036213 Length:217 Species:Drosophila melanogaster
Sequence 2:XP_217361.5 Gene:RGD1566137 / 301299 RGDID:1566137 Length:217 Species:Rattus norvegicus


Alignment Length:217 Identity:162/217 - (74%)
Similarity:189/217 - (87%) Gaps:0/217 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MASKVSRDTLYEGVNGLLEASAKKKRGFLETVELQIGLKNYDPQKDKRFSGTVKLKHIPRPKMKV 65
            |:||||||||||.|..:|..:.:|:|.|||||||||.||||||||||||||||:||..||||..|
  Rat     1 MSSKVSRDTLYEAVREVLHGNQRKRRKFLETVELQISLKNYDPQKDKRFSGTVRLKSTPRPKFSV 65

  Fly    66 CILGDQQHCDEAKANNVDFMDAEALKKLNKNKKLVKKLAKSYDAFLASESLIKQIPRLLGPGLNK 130
            |:||||||||||||.::..||.||||||||||||||||.|.||.|||||||||||||:|||||||
  Rat    66 CVLGDQQHCDEAKAVDIPHMDIEALKKLNKNKKLVKKLDKKYDGFLASESLIKQIPRILGPGLNK 130

  Fly   131 AGKFPALLSHQESMIGKIEEVKSTIKFQMKKVLCLSVAVGHVGMKSDELAQNVNLSINFLVSLLK 195
            |||||:||:|.|:|:.|::||||||||||||:|||:|||||:.|..|||..|::|::||||||||
  Rat   131 AGKFPSLLTHNENMVAKVDEVKSTIKFQMKKLLCLAVAVGHMKMTDDELVYNIHLAVNFLVSLLK 195

  Fly   196 KNWQNVRSLHVKSSMGPPQRLY 217
            |||||||:|::||:||.||.||
  Rat   196 KNWQNVRALYIKSTMGKPQHLY 217

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RpL10AbNP_648514.1 Ribosomal_L1 3..217 CDD:412308 159/213 (75%)
RGD1566137XP_217361.5 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1172076at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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