DRSC/TRiP Functional Genomics Resources

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Protein Alignment RpL10Ab and rpl102

DIOPT Version :9

Sequence 1:NP_648514.1 Gene:RpL10Ab / 39338 FlyBaseID:FBgn0036213 Length:217 Species:Drosophila melanogaster
Sequence 2:NP_596267.1 Gene:rpl102 / 2540378 PomBaseID:SPBC30D10.18c Length:216 Species:Schizosaccharomyces pombe


Alignment Length:215 Identity:146/215 - (67%)
Similarity:171/215 - (79%) Gaps:0/215 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 SKVSRDTLYEGVNGLLEASAKKKRGFLETVELQIGLKNYDPQKDKRFSGTVKLKHIPRPKMKVCI 67
            ||||...:...|..:|:.|.:|||.|.|||||||||||||||:|||||||:||.::|||.|.:||
pombe     2 SKVSPANIRSSVETILKGSEEKKRNFTETVELQIGLKNYDPQRDKRFSGTIKLPNVPRPNMSICI 66

  Fly    68 LGDQQHCDEAKANNVDFMDAEALKKLNKNKKLVKKLAKSYDAFLASESLIKQIPRLLGPGLNKAG 132
            |||....|.||...||.|..:.||||||||||||||||.||||:|||.|||||||||||||:|||
pombe    67 LGDAHDLDRAKHGGVDAMSVDDLKKLNKNKKLVKKLAKKYDAFIASEVLIKQIPRLLGPGLSKAG 131

  Fly   133 KFPALLSHQESMIGKIEEVKSTIKFQMKKVLCLSVAVGHVGMKSDELAQNVNLSINFLVSLLKKN 197
            |||:.:||.:.:.|||.|||||||||:||||||.||||||.|..::||.|::|:||||||||||.
pombe   132 KFPSPVSHSDDLYGKIIEVKSTIKFQLKKVLCLGVAVGHVDMAEEQLAANLSLAINFLVSLLKKG 196

  Fly   198 WQNVRSLHVKSSMGPPQRLY 217
            |||:.||.:||:||.|.|||
pombe   197 WQNIGSLVIKSTMGKPYRLY 216

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RpL10AbNP_648514.1 Ribosomal_L1 3..217 CDD:412308 144/213 (68%)
rpl102NP_596267.1 PTZ00029 1..216 CDD:185405 144/213 (68%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 274 1.000 Domainoid score I319
eggNOG 1 0.900 - - E1_COG0081
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H68543
Inparanoid 1 1.050 292 1.000 Inparanoid score I625
OMA 1 1.010 - - QHG62172
OrthoFinder 1 1.000 - - FOG0001990
OrthoInspector 1 1.000 - - mtm9287
orthoMCL 1 0.900 - - OOG6_100869
Panther 1 1.100 - - LDO PTHR23105
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1114
SonicParanoid 1 1.000 - - X1303
TreeFam 1 0.960 - -
1413.860

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