DRSC/TRiP Functional Genomics Resources

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Protein Alignment RpL10Ab and mrpl-1

DIOPT Version :9

Sequence 1:NP_648514.1 Gene:RpL10Ab / 39338 FlyBaseID:FBgn0036213 Length:217 Species:Drosophila melanogaster
Sequence 2:NP_501257.1 Gene:mrpl-1 / 177549 WormBaseID:WBGene00017997 Length:377 Species:Caenorhabditis elegans


Alignment Length:181 Identity:39/181 - (21%)
Similarity:69/181 - (38%) Gaps:50/181 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    32 VELQIGLKNYDPQKDKRFSGTVKLKHIPRP---KMKVCILGDQQHCDEAKANNVDFMD--AEALK 91
            :.|::.|.....::.|..:|:.::..:|.|   ..|..||        |.||:|...:  .|:..
 Worm   137 IRLRLELNMTTERQTKMVTGSDEIVPVPHPFNHNEKRTIL--------AFANDVKLQELAVESGA 193

  Fly    92 KLNKNKKLVKKLAK------SYDAFLASES------------LIKQIPRLLGPGLNKAGKFPALL 138
            ::...:..:||:.|      .|| |..|.|            |..:.|.....||.:  ..|.| 
 Worm   194 EMALGQDTIKKIIKGQFRTDDYD-FCVSHSDMGSSILPLRGILKMRFPTRANGGLGE--NLPEL- 254

  Fly   139 SHQESMIGKIEEVKSTIKFQMK-----KVLCLS-VAVGHVGMKSDELAQNV 183
                     ||:.|:.:|..:|     .:..|| ..||.:.|.::.:..|:
 Worm   255 ---------IEKFKNGVKLNIKGDPVYPIWGLSDCVVGRLSMPNEHIEANI 296

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RpL10AbNP_648514.1 Ribosomal_L1 3..217 CDD:412308 39/181 (22%)
mrpl-1NP_501257.1 Ribosomal_L1 112..261 CDD:294228 31/144 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0081
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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