DRSC/TRiP Functional Genomics Resources

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Protein Alignment RpL10Ab and rpl-10a

DIOPT Version :10

Sequence 1:NP_648514.1 Gene:RpL10Ab / 39338 FlyBaseID:FBgn0036213 Length:217 Species:Drosophila melanogaster
Sequence 2:NP_491061.1 Gene:rpl-10a / 171853 WormBaseID:WBGene00004412 Length:216 Species:Caenorhabditis elegans


Alignment Length:215 Identity:151/215 - (70%)
Similarity:187/215 - (86%) Gaps:0/215 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 SKVSRDTLYEGVNGLLEASAKKKRGFLETVELQIGLKNYDPQKDKRFSGTVKLKHIPRPKMKVCI 67
            |||||::|.|.:..:|:.|::|.|.|.||:|||||||||||||||||||:::|||||||.||||:
 Worm     2 SKVSRESLNEAIAEVLKGSSEKPRKFRETIELQIGLKNYDPQKDKRFSGSIRLKHIPRPNMKVCV 66

  Fly    68 LGDQQHCDEAKANNVDFMDAEALKKLNKNKKLVKKLAKSYDAFLASESLIKQIPRLLGPGLNKAG 132
            .|||.|.|||.|.::..|.|:.||||||.|||:||||||||||:|||||||||||:|||||||||
 Worm    67 FGDQHHLDEAAAGDIPSMSADDLKKLNKQKKLIKKLAKSYDAFIASESLIKQIPRILGPGLNKAG 131

  Fly   133 KFPALLSHQESMIGKIEEVKSTIKFQMKKVLCLSVAVGHVGMKSDELAQNVNLSINFLVSLLKKN 197
            |||::::|.||:..|.:|:::|:||||||||||||||||||:..:||..|::|||||||||||||
 Worm   132 KFPSVVTHGESLQSKSDEIRATVKFQMKKVLCLSVAVGHVGLTQEELVSNISLSINFLVSLLKKN 196

  Fly   198 WQNVRSLHVKSSMGPPQRLY 217
            |||||||::||:||.|||:|
 Worm   197 WQNVRSLNIKSTMGKPQRVY 216

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RpL10AbNP_648514.1 Ribosomal_L1 3..217 CDD:469720 150/213 (70%)
rpl-10aNP_491061.1 Ribosomal_L1 1..216 CDD:469720 150/213 (70%)

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