DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5946 and PGA3

DIOPT Version :9

Sequence 1:NP_001287035.1 Gene:CG5946 / 39336 FlyBaseID:FBgn0036211 Length:330 Species:Drosophila melanogaster
Sequence 2:NP_013581.1 Gene:PGA3 / 854914 SGDID:S000004594 Length:312 Species:Saccharomyces cerevisiae


Alignment Length:323 Identity:97/323 - (30%)
Similarity:160/323 - (49%) Gaps:70/323 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 VESNFVPLAVGVVAV-----LAGAL----------IVHYLLNKKSTKPRRE--PNRTARLRTLVD 52
            |...::|.|:.||.|     ::|.|          ::.::....:.|.||.  |:|...|.    
Yeast    16 VHGIYIPAALFVVGVAITTYMSGELKILWSLPILFMIIFVRAYSAYKRRRSLYPDRWTSLE---- 76

  Fly    53 PNDKYLLPLIEKENLSHDTRRFRFGLPSKQHVLGLPVGQHIHLIATIDNELIIRPYTPISSDEDV 117
                    |.::..:|.:|..:||.|.::...|.:|.|.|:.:...||.:..:|.|.||||..:.
Yeast    77 --------LEDQTIISKNTALYRFKLKTRLESLDIPAGHHVAVRVPIDGKQEVRYYNPISSKLES 133

  Fly   118 GYVDLVVKVYFKDSHPKFPAGGKMTQHLEQLELGDKISFRGPSGRLQYLGNGTFSIKKLRKDPPK 182
            ||:|||||.|         ..||::::...|..||.:.|:||.|.|.|..|              
Yeast   134 GYLDLVVKAY---------VDGKVSKYFAGLNSGDTVDFKGPIGTLNYEPN-------------- 175

  Fly   183 HVTAKRVNMIAGGTGITPMLQLAREVLKRSDKDKTELALLFANQSEKDILLRAELDELAQKHPDQ 247
              ::|.:.::|||:||||:||:..|:: ...:|.|:::||:||::|.||||:.||||:|:|:| .
Yeast   176 --SSKHLGIVAGGSGITPVLQILNEII-TVPEDLTKVSLLYANETENDILLKDELDEMAEKYP-H 236

  Fly   248 FKIWYTVDKANEAIKRMPRMGNARFVAWSYNTGHVNDDMMQQHLYPPGEDTLCLLCGPPPMVN 310
            |::.|.|...::              .|:.:.|::..|.|.::|....||...|:|||..|.|
Yeast   237 FQVHYVVHYPSD--------------RWTGDVGYITKDQMNRYLPEYSEDNRLLICGPDGMNN 285

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5946NP_001287035.1 PTZ00319 51..330 CDD:173521 83/260 (32%)
cyt_b5_reduct_like 59..330 CDD:99780 83/252 (33%)
PGA3NP_013581.1 cyt_b5_reduct_like 75..312 CDD:99780 84/264 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C157344672
Domainoid 1 1.000 83 1.000 Domainoid score I1936
eggNOG 1 0.900 - - E1_COG0543
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 151 1.000 Inparanoid score I1116
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54129
OrthoFinder 1 1.000 - - FOG0000472
OrthoInspector 1 1.000 - - otm46942
orthoMCL 1 0.900 - - OOG6_100179
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
109.660

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