DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG5946 and Cyb5rl

DIOPT Version :10

Sequence 1:NP_001287035.1 Gene:CG5946 / 39336 FlyBaseID:FBgn0036211 Length:330 Species:Drosophila melanogaster
Sequence 2:XP_038967057.1 Gene:Cyb5rl / 689035 RGDID:1597451 Length:339 Species:Rattus norvegicus


Alignment Length:280 Identity:75/280 - (26%)
Similarity:112/280 - (40%) Gaps:59/280 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 NKKSTKPRREPNRTARLRTLVDPNDKYLLPLIEKENLSHDTRRFRFGLPSKQHVLGLPVGQHIHL 95
            |..|....::|..:....|.:.|.......:...|.::.||...||.||...| |||..|||:.|
  Rat    52 NDMSLLSGKQPPESQGCSTKLSPETFLAFHISTMEKVTRDTYLVRFTLPGNCH-LGLLPGQHLIL 115

  Fly    96 IATIDNELIIRPYTPISSDEDVGYVDLVVKVYFKDSHPKFPAGGKMTQHLEQLELGDKISFRGPS 160
            ...:|:..|.|.|||||.....||.|:::|.|         ..|.|::::|....||...:|||.
  Rat   116 RGVVDDLEIQRAYTPISPATAQGYFDVLIKCY---------ETGLMSRYVESWRPGDTAFWRGPF 171

  Fly   161 GRLQYLGNGTFSIKKLRKDPPKHVTAKRVNMIAGGTGITPMLQLAREVLKRSDKDKTELALLFAN 225
            |...|             :|.|:   ..:.|:|.|||:.||:.:.:.:....| |:|.:.|:...
  Rat   172 GSFLY-------------EPKKY---GELLMLAAGTGLAPMVPIVQSITDNED-DETFVTLVGCF 219

  Fly   226 QSEKDILLRAELDELAQKHPDQFKIWYTVDKANEAIKRMPRMGNAR--FV-----AWSYNTGHVN 283
            ::.:||.|:....|       |.:.|                 |.|  ||     .|:..||...
  Rat   220 KTFEDIYLKTFFQE-------QARFW-----------------NVRTFFVLSQPWPWTLITGTKR 260

  Fly   284 DDMMQQHLYPPGEDTLCLLC 303
            .....|..:.||. .|.|.|
  Rat   261 SPDQSQTTWSPGL-ALLLTC 279

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5946NP_001287035.1 PLN02252 <50..330 CDD:215141 71/261 (27%)
Cyb5rlXP_038967057.1 Oxidored-like 16..51 CDD:462904
cyt_b5_reduct_like 82..>257 CDD:99780 62/225 (28%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.