DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5946 and cyb5r4

DIOPT Version :10

Sequence 1:NP_001287035.1 Gene:CG5946 / 39336 FlyBaseID:FBgn0036211 Length:330 Species:Drosophila melanogaster
Sequence 2:XP_005173509.1 Gene:cyb5r4 / 553685 ZFINID:ZDB-GENE-050522-225 Length:577 Species:Danio rerio


Alignment Length:274 Identity:78/274 - (28%)
Similarity:135/274 - (49%) Gaps:61/274 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    49 TLVDPNDKYLL----PLIEKENLSHDTRRFRFGLP--SKQHVLGLPVGQHIHLIATIDNELIIRP 107
            |.:...|:.|.    .|:.|.:::|:|:..|..||  |:..|   |||:|::|..::....:::|
Zfish   322 TFIQCKDRGLFYRECVLLSKTDVTHNTQLLRLQLPPGSRMQV---PVGRHVYLKTSVQGTDVVKP 383

  Fly   108 YT--------PISSDEDVGY-VDLVVKVYFKDSHPKFPAGGKMTQHLEQLELGDKISFRGPSGRL 163
            ||        |..|..:||. :.|::|||         ..|.:|.|:..|.:|..:|..||.|.|
Zfish   384 YTAVDQMLIPPSQSSAEVGSDIHLMIKVY---------PDGVLTPHIANLPIGASLSVGGPEGSL 439

  Fly   164 QYLGNGTFSIKKLRKDPPKHVTAKRVNMIAGGTGITPMLQLAREVLKRSDKDKTELALLFANQSE 228
                    :::.||     .||  .:.|:|.|||.|||.:|.|..|:.....: ::.|:|.|:.|
Zfish   440 --------TLRVLR-----DVT--HLYMLAAGTGFTPMARLIRLALQEFTVIR-KMKLMFFNRQE 488

  Fly   229 KDILLRAELDELAQKHPDQFKIWYTVDKANEAIKRMPRMGNARFVAWSYNTGHVNDDMMQQHLYP 293
            :|||.:::||||..|. ::|::.:.:.:..:              :|:...|.::..|:|..|..
Zfish   489 RDILWQSQLDELCTKE-ERFEVQHVLSEPAD--------------SWTGRRGRIDACMLQNFLER 538

  Fly   294 PGEDTLCL--LCGP 305
            | |::.||  :|||
Zfish   539 P-ENSKCLVCVCGP 551

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5946NP_001287035.1 PLN02252 <50..330 CDD:215141 77/273 (28%)
cyb5r4XP_005173509.1 Cyt-b5 110..182 CDD:459698
p23_NCB5OR 228..314 CDD:107240
cyt_b5_reduct_like 336..575 CDD:99780 75/260 (29%)
Blue background indicates that the domain is not in the aligned region.

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