DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG5946 and hpo-19

DIOPT Version :9

Sequence 1:NP_001287035.1 Gene:CG5946 / 39336 FlyBaseID:FBgn0036211 Length:330 Species:Drosophila melanogaster
Sequence 2:NP_504638.1 Gene:hpo-19 / 179029 WormBaseID:WBGene00020268 Length:309 Species:Caenorhabditis elegans


Alignment Length:335 Identity:175/335 - (52%)
Similarity:237/335 - (70%) Gaps:34/335 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 IVESNFVPLAVGVVAVLAGALIVH--------YLLNKKSTKPRREPNRTARLRTLVDPNDKYLLP 60
            :||:|.:.:..|||.|.:.|:.::        :.|.|||.|           |||||.:.||.||
 Worm     1 MVENNTLIITGGVVVVSSIAIYIYLKATNTCPFSLCKKSKK-----------RTLVDDSVKYPLP 54

  Fly    61 LIEKENLSHDTRRFRFGLPSKQHVLGLPVGQHIHLIATIDNELIIRPYTPISSDEDVGYVDLVVK 125
            ||||..:|||||:||||||||.|:||||:|||::|.|.||.::|:|||||:|||||:|:|||:||
 Worm    55 LIEKFEISHDTRKFRFGLPSKDHILGLPIGQHVYLTANIDGKIIVRPYTPVSSDEDLGFVDLMVK 119

  Fly   126 VYFKDSHPKFPAGGKMTQHLEQLELGDKISFRGPSGRLQYLGNGTFSIKKLRKDPPKHVTAKRVN 190
            ||||:::.|||.||||:||||.|::||.|:||||.|.:.|.|:|.||||..:|..||:...|.::
 Worm   120 VYFKNTNEKFPEGGKMSQHLESLKIGDTINFRGPQGNIVYKGHGLFSIKADKKAEPKNRVFKHLS 184

  Fly   191 MIAGGTGITPMLQLAREVLKRSDKDKTELALLFANQSEKDILLRAELDELAQKHPDQFKIWYTVD 255
            |||||||||||||:...:| |...|.|::.||||||:|.|||.|.|||:||::||.:|::|||||
 Worm   185 MIAGGTGITPMLQVIAAIL-RDPTDTTQIRLLFANQTEDDILCRQELDDLAKEHPTRFRVWYTVD 248

  Fly   256 KANEAIKRMPRMGNARFVAWSYNTGHVNDDMMQQHLYPPGEDTLCLLCGPPPMVNYTCIPGLERL 320
                   |.|       |.|||::|.:||.|::::|:|||:|:..||||||||:|:.|||.||:|
 Worm   249 -------RPP-------VMWSYSSGFINDSMIKENLFPPGDDSAVLLCGPPPMINFACIPNLEKL 299

  Fly   321 GHRAEQRFSY 330
            .:....|..:
 Worm   300 EYDPANRLLF 309

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5946NP_001287035.1 PTZ00319 51..330 CDD:173521 159/278 (57%)
cyt_b5_reduct_like 59..330 CDD:99780 155/270 (57%)
hpo-19NP_504638.1 PTZ00319 9..309 CDD:173521 172/325 (53%)
cyt_b5_reduct_like 53..309 CDD:99780 155/270 (57%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160167394
Domainoid 1 1.000 167 1.000 Domainoid score I2333
eggNOG 1 0.900 - - E1_COG0543
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H6182
Inparanoid 1 1.050 347 1.000 Inparanoid score I1361
Isobase 1 0.950 - 0 Normalized mean entropy S798
OMA 1 1.010 - - QHG54129
OrthoDB 1 1.010 - - D1311668at2759
OrthoFinder 1 1.000 - - FOG0000472
OrthoInspector 1 1.000 - - otm14161
orthoMCL 1 0.900 - - OOG6_100179
Panther 1 1.100 - - LDO PTHR19370
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2205
SonicParanoid 1 1.000 - - X606
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1716.790

Return to query results.
Submit another query.