DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cubn2 and tnfaip6

DIOPT Version :10

Sequence 1:NP_729748.3 Gene:Cubn2 / 39334 FlyBaseID:FBgn0259140 Length:3613 Species:Drosophila melanogaster
Sequence 2:NP_001035333.2 Gene:tnfaip6 / 678516 ZFINID:ZDB-GENE-060421-2654 Length:271 Species:Danio rerio


Alignment Length:150 Identity:55/150 - (36%)
Similarity:81/150 - (54%) Gaps:11/150 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly  1029 GSVGDVFDGDLLTINLHTNWPRLEIYSIQFDIVQQDSCGGTFTARFGYIKSPNWPKNYGESQMCE 1093
            |.||.:..|  ..:|....|   ::|.  ::.|.:: |||..|.....:.||.:|..|.:.|:|.
Zfish   116 GKVGIIDYG--YRLNKSERW---DVYC--YNPVAKE-CGGVHTDPEKVLVSPGYPDEYQDEQICY 172

  Fly  1094 WILRAPFGHRIELVVHNFTLEEEYSSTGCWTDWLEIRNGDSESSPLIGRYCGNEIPSRIPSFGNV 1158
            |.:|..|||||.|...:|.:||:   |.|.:|.|||.:...:.|..:|||||:::|....|.|||
Zfish   173 WHIRVRFGHRIRLHFLDFDIEED---TDCLSDHLEIYDSYDDVSGFVGRYCGDQLPDDFISTGNV 234

  Fly  1159 LHLKFKSDDSMEEKGFLLSW 1178
            :.|||.||.|:...||.|.:
Zfish   235 MTLKFLSDSSVTAGGFKLQY 254

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cubn2NP_729748.3 cubilin_NTD 38..141 CDD:412063
EGF_CA 156..190 CDD:238011
EGF_CA 192..233 CDD:238011
EGF_CA 290..328 CDD:214542
EGF_CA 330..374 CDD:214542
EGF 427..455 CDD:394967
EGF_CA 462..496 CDD:238011
CUB 503..619 CDD:238001
CUB 624..738 CDD:238001
CUB 745..854 CDD:238001
CUB 857..963 CDD:238001
CUB 1066..1179 CDD:238001 47/112 (42%)
CUB 1185..1293 CDD:238001
CUB 1303..1406 CDD:238001
CUB 1411..1523 CDD:238001
CUB 1530..1648 CDD:238001
CUB 1754..1862 CDD:238001
CUB 1979..2091 CDD:238001
CUB 2210..2321 CDD:238001
CUB 2327..2441 CDD:238001
CUB 2688..2782 CDD:412131
CUB 2810..2911 CDD:238001
CUB 3029..3143 CDD:238001
CUB 3169..3249 CDD:412131
CUB 3499..3607 CDD:238001
tnfaip6NP_001035333.2 Link_domain_TSG_6_like 46..138 CDD:239592 7/28 (25%)
CUB 145..254 CDD:395345 47/111 (42%)
Blue background indicates that the domain is not in the aligned region.

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