DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cubn2 and CG34370

DIOPT Version :10

Sequence 1:NP_729748.3 Gene:Cubn2 / 39334 FlyBaseID:FBgn0259140 Length:3613 Species:Drosophila melanogaster
Sequence 2:NP_995921.2 Gene:CG34370 / 5740565 FlyBaseID:FBgn0085399 Length:952 Species:Drosophila melanogaster


Alignment Length:1052 Identity:211/1052 - (20%)
Similarity:336/1052 - (31%) Gaps:404/1052 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly   490 GYTGTTCSHQRFFCGVT------IRGP--SGQLHYPPNTADGDYQADERCPFIIRT----NRNMV 542
            |.:|::....|..|..|      |..|  |.|....|.|          |.:..||    .|:.|
  Fly    65 GGSGSSSDVSRDHCNKTVDIFEDISSPEVSNQNVGRPLT----------CWYRFRTLKGAPRDFV 119

  Fly   543 LNLTFTQF---QLEDSADCTADFLQLHDGNSLSS----RLIGRFCG-SRLPMT---NGSVITT-- 594
            |.|.|.:|   ||.::..|...:||:.|||:.:.    |..|.||| :..|.|   ..|.:..  
  Fly   120 LRLRFKKFKVGQLLNATHCEGGYLQIVDGNAKTDVSNRREPGMFCGEAEQPQTFISETSYVKVLF 184

  Fly   595 -----QEQVFFWF--RSDNQTQ---GKGFH----------VIWNSLPFSCGETINLTSTQTGVLR 639
                 .:|.:|.|  |::.||:   ..|.|          |:..|.   |.........||..::
  Fly   185 HTDNFTDQTYFTFDSRAEQQTEVYLRYGQHPELYPNRRGEVVQGSY---CEREYRDCRLQTCYVQ 246

  Fly   640 SPGYPGQARPELDCRWQLTAPFGYRLLLRFYDISLGSSEASAGNCSQDSLIVYDSDRQLLRACQS 704
            ||.|||.....|:||::|.....|   ::.|              .|:.....|..|     |::
  Fly   247 SPAYPGLYPRALNCRYKLHTRQPY---IKLY--------------LQNEQFAVDGQR-----CEN 289

  Fly   705 IQPPPVYSSSNSLRLDFHTDAIRSDSSFQMHYEVVPGHPGCGGVYTESRGRISGYMNFEVCLYLI 769
            :...|                ||...|...|                                  
  Fly   290 VMTCP----------------IRPIGSGNEH---------------------------------- 304

  Fly   770 EQPRGTQVKLVIDRVSLVQSLSCHYLKIEIFDGRSTDAPLLRRICGSHEESELEPIISIGNVILV 834
                                  |.|..:.::|||...:||:.:.||..:    .|...||....:
  Fly   305 ----------------------CPYDWLAVYDGRDEHSPLIGKFCGLGK----FPFSIIGTSQYM 343

  Fly   835 RYEYALS--GVRLSKSFDLTYTRVCTGNFNTNSGIISTPNYPGPYFDDMTCTYNLTGPLDTA-VR 896
            ..|:..|  |..|:..|          :||..       |:|              |.::|| ::
  Fly   344 YVEFVTSPAGPLLNTGF----------HFNVG-------NWP--------------GHVETAGIK 377

  Fly   897 MRITDLSLGTANNENDTSYLDVYLSADQKRHIVKSTDNLILLSH--SNRASLVFHGSGG-GRGMR 958
            ..:.|..|.:.:.::.::...::||                ::|  ....|..:|..|. |..:|
  Fly   378 HGVCDWLLSSDSLKDSSASEGIFLS----------------IAHWYPPNTSCSYHIKGHVGEIVR 426

  Fly   959 LEY-NFVPNQ-----------CGGFLN-------EPGRRYVTAVRGTFCQWFIDFPGRKKISIHT 1004
            |.: :|..|:           ||..|.       :|.|     :..|||..|    .|....:..
  Fly   427 LYFPSFRINRIESPILKYEGDCGESLTIYDSDHADPAR-----IIKTFCDTF----SRPMEKVDF 482

  Fly  1005 LGPTPSISI-YDNSTSPGKLVNSYSGSVGDVFDGDLLTINLHTNWPRLEIY-SIQF-DIVQQDSC 1066
            :..:||:.: :|:.|      .|||||            :|: .|...:.: :.:| |.|....|
  Fly   483 VSTSPSLYVQFDSKT------GSYSGS------------SLY-YWAHYDFFNNTRFGDPVPNTLC 528

  Fly  1067 GGTFTA---RFGYIKSP----NWPKNYGESQMCEWIL---RAPFGHRIELVVHNFTLEE-EYSST 1120
            .....|   ..|.::||    .:.:..|....|::..   |..:...| :.|::.:.:| .|:|.
  Fly   529 DEVMYAWKHPGGRLRSPLNSLIFKRTGGSDVRCQYKFVTDRRLYARAI-IEVNSVSFKELPYNSN 592

  Fly  1121 GC-------------WTDWLEIRNGDSESSPLIGRYCGNEIPS--RIPSFGNVLHLK-------- 1162
            .|             |.:..:.:|.       :..:|.| ||.  |:.|..:.::|:        
  Fly   593 ACTRCHEERVDKLVIWEERDKYQNN-------LACFCDN-IPRAVRVISSADQMNLEMIVQGQHA 649

  Fly  1163 ----FKSDDSMEEKGFLLSWQQMGAGCG----GKLSSSMGTIHSPH--LLAGNRGILA------- 1210
                ||:.:.:.|..:..:   .|..||    |  .|..|.:..|:  .||...|.:|       
  Fly   650 ITSYFKNPNPLFEATYEFA---HGPLCGPITLG--PSPDGELVFPYKKALAMVSGPMAPPEHHYR 709

  Fly  1211 ---CDWQIIVAEGSRVSLQL-------RSNDNR---------------ICSGQLTL-YDGP--TT 1247
               |.|::.||....:.|.|       ||.|:.               :|...::| .|.|  ||
  Fly   710 REKCIWELKVAAQRDLWLNLEKARFADRSCDSAKIEVYLAGRLEPRFVVCPENISLARDLPILTT 774

  Fly  1248 ASNPIVIRCNGTIAKPLQSTGNRVLVRYDVGHDAPDGTDFMLNY--------------------Q 1292
            |.    :...|...:||.     ||::| .|...|....|.|.:                    .
  Fly   775 AE----LGATGADQEPLP-----VLIQY-TGDGQPGRNIFRLVWTELFHLPRNPDGSLAASLLQD 829

  Fly  1293 TNCRVRLEG-----------LQGAIETPNFPENYPPGQ---DCEWDIRAGGRKNHL----QLIFS 1339
            ..|..|..|           ..|....||........|   ..||::...|..:|.    ||:..
  Fly   830 GGCDFRCPGDTEVCIPKHLLCNGIANCPNVTHTSTLSQLTRHIEWNLEQLGLLHHAGDYQQLVLH 894

  Fly  1340 HLSVEKFSSICL 1351
            ..|.|    |||
  Fly   895 DESPE----ICL 902

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cubn2NP_729748.3 cubilin_NTD 38..141 CDD:412063
EGF_CA 156..190 CDD:238011
EGF_CA 192..233 CDD:238011
EGF_CA 290..328 CDD:214542
EGF_CA 330..374 CDD:214542
EGF 427..455 CDD:394967
EGF_CA 462..496 CDD:238011 2/5 (40%)
CUB 503..619 CDD:238001 42/160 (26%)
CUB 624..738 CDD:238001 23/113 (20%)
CUB 745..854 CDD:238001 17/110 (15%)
CUB 857..963 CDD:238001 18/110 (16%)
CUB 1066..1179 CDD:238001 26/150 (17%)
CUB 1185..1293 CDD:238001 36/168 (21%)
CUB 1303..1406 CDD:238001 15/56 (27%)
CUB 1411..1523 CDD:238001
CUB 1530..1648 CDD:238001
CUB 1754..1862 CDD:238001
CUB 1979..2091 CDD:238001
CUB 2210..2321 CDD:238001
CUB 2327..2441 CDD:238001
CUB 2688..2782 CDD:412131
CUB 2810..2911 CDD:238001
CUB 3029..3143 CDD:238001
CUB 3169..3249 CDD:412131
CUB 3499..3607 CDD:238001
CG34370NP_995921.2 CUB 88..195 CDD:238001 32/116 (28%)
CUB 244..363 CDD:238001 37/226 (16%)
CUB 407..509 CDD:238001 28/129 (22%)
Blue background indicates that the domain is not in the aligned region.

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