DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cubn2 and c6ast3

DIOPT Version :10

Sequence 1:NP_729748.3 Gene:Cubn2 / 39334 FlyBaseID:FBgn0259140 Length:3613 Species:Drosophila melanogaster
Sequence 2:XP_068078391.1 Gene:c6ast3 / 541399 ZFINID:ZDB-GENE-050320-99 Length:257 Species:Danio rerio


Alignment Length:290 Identity:61/290 - (21%)
Similarity:93/290 - (32%) Gaps:100/290 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly  3370 LQLAFHSDGLEESQGFEVIIRRKSTCNRNYTELSQ--------VIDTSNLTNCTDY-IRVPRGYS 3425
            |.|.:.::|.........::.|   .||.....:.        .::..|...||.| ...|:...
Zfish    13 LMLVYSAEGKPAQLSVSELLHR---ANRGIIPEADEPKLLDDIAVNEKNADPCTSYGCLWPKYSD 74

  Fly  3426 ITLYVMTVLFDSFDNNYFRVIDVQSNKTIFTNSDIQWETKAMITSTNELRLESRQVSSLKFFYFS 3490
            ..:||..|:    .|:|                           |:.||.:..|.:.|  |.|.:
Zfish    75 GKIYVPYVI----ANHY---------------------------SSRELEIIQRGLDS--FSYST 106

  Fly  3491 TSNQFPGGCGGD-LAVGGSVGSYLENPSYEGRNSSLCTWKISVPAGGSLRFSFAE--------FN 3546
            ....||.|...| :::....|.|    ||.||.....|  :|:...|.|..|..:        ||
Zfish   107 CIRFFPRGNERDYISIESRSGCY----SYVGRQGYAQT--VSLARSGCLYHSTVQHELLHALGFN 165

  Fly  3547 MGSESNCD------------LDNVRF---------------YDSVVDDQRLVKAICGSRIPDMFT 3584
            .....| |            ||::::               |.||:..:|.  |...:.:|.|..
Zfish   166 HEQTRN-DRDNHIQVIWENILDDMKYNFNKINTLNQGTPYDYSSVMQYERY--AFSKNGLPTMIP 227

  Fly  3585 IAKNNVII--VAKKSQNFDGLGFRMDIIEI 3612
            |..||..:  ..:.|||        |||.|
Zfish   228 IPNNNAALGTSTEMSQN--------DIIRI 249

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cubn2NP_729748.3 cubilin_NTD 38..141 CDD:412063
EGF_CA 156..190 CDD:238011
EGF_CA 192..233 CDD:238011
EGF_CA 290..328 CDD:214542
EGF_CA 330..374 CDD:214542
EGF 427..455 CDD:394967
EGF_CA 462..496 CDD:238011
CUB 503..619 CDD:238001
CUB 624..738 CDD:238001
CUB 745..854 CDD:238001
CUB 857..963 CDD:238001
CUB 1066..1179 CDD:238001
CUB 1185..1293 CDD:238001
CUB 1303..1406 CDD:238001
CUB 1411..1523 CDD:238001
CUB 1530..1648 CDD:238001
CUB 1754..1862 CDD:238001
CUB 1979..2091 CDD:238001
CUB 2210..2321 CDD:238001
CUB 2327..2441 CDD:238001
CUB 2688..2782 CDD:412131
CUB 2810..2911 CDD:238001
CUB 3029..3143 CDD:238001
CUB 3169..3249 CDD:412131
CUB 3499..3607 CDD:238001 31/145 (21%)
c6ast3XP_068078391.1 ZnMc 74..255 CDD:469599 50/226 (22%)
Blue background indicates that the domain is not in the aligned region.

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