DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cubn2 and he1.2

DIOPT Version :10

Sequence 1:NP_729748.3 Gene:Cubn2 / 39334 FlyBaseID:FBgn0259140 Length:3613 Species:Drosophila melanogaster
Sequence 2:NP_998800.2 Gene:he1.2 / 407971 ZFINID:ZDB-GENE-030131-2100 Length:263 Species:Danio rerio


Alignment Length:209 Identity:37/209 - (17%)
Similarity:66/209 - (31%) Gaps:87/209 - (41%)


- Green bases have known domain annotations that are detailed below.


  Fly  2676 LRRFRATYRRHNCGGRLQAAEGVTIESPDLLTTLNDAYGEV--------------------ECLW 2720
            ||.|.|.:          .:|..|::....:...|....||                    .|.|
Zfish    22 LREFEAIF----------VSEPETVDITTQILETNKGSSEVLFEGDVVLPKNRNALICEDKSCFW 76

  Fly  2721 TLSNSNG-----YVLEGNVTLTDR--------------CDR--------EYIVI----------- 2747
            . .|:|.     ||:.|..::.|:              |.|        :|:.|           
Zfish    77 K-KNANNIVEVPYVVSGEFSINDKSVIANAISIFHAQTCIRFVPRSIQADYLSIENKDGCYSAIG 140

  Fly  2748 FSGQSEVGRICRGMAMNSTLLERPFSTIL--YHSESRLAQQSKFILQAWKSVSSGNAIRIDHRPS 2810
            .:|..:|..:.|...:.|.:.:...:..|  ||.:|| :.:.:::...|.::|.|.|.       
Zfish   141 RTGGKQVVSLNRKGCVYSGIAQHELNHALGFYHEQSR-SDRDQYVRINWNNISPGMAY------- 197

  Fly  2811 PPVTISSKNYLESK 2824
                    |:|:.|
Zfish   198 --------NFLKQK 203

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cubn2NP_729748.3 cubilin_NTD 38..141 CDD:412063
EGF_CA 156..190 CDD:238011
EGF_CA 192..233 CDD:238011
EGF_CA 290..328 CDD:214542
EGF_CA 330..374 CDD:214542
EGF 427..455 CDD:394967
EGF_CA 462..496 CDD:238011
CUB 503..619 CDD:238001
CUB 624..738 CDD:238001
CUB 745..854 CDD:238001
CUB 857..963 CDD:238001
CUB 1066..1179 CDD:238001
CUB 1185..1293 CDD:238001
CUB 1303..1406 CDD:238001
CUB 1411..1523 CDD:238001
CUB 1530..1648 CDD:238001
CUB 1754..1862 CDD:238001
CUB 1979..2091 CDD:238001
CUB 2210..2321 CDD:238001
CUB 2327..2441 CDD:238001
CUB 2688..2782 CDD:412131 24/153 (16%)
CUB 2810..2911 CDD:238001 3/15 (20%)
CUB 3029..3143 CDD:238001
CUB 3169..3249 CDD:412131
CUB 3499..3607 CDD:238001
he1.2NP_998800.2 ZnMc_hatching_enzyme 81..263 CDD:239810 25/139 (18%)
Blue background indicates that the domain is not in the aligned region.

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