DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42255 and Nrx-IV

DIOPT Version :9

Sequence 1:NP_729748.3 Gene:CG42255 / 39334 FlyBaseID:FBgn0259140 Length:3613 Species:Drosophila melanogaster
Sequence 2:NP_524034.2 Gene:Nrx-IV / 39387 FlyBaseID:FBgn0013997 Length:1284 Species:Drosophila melanogaster


Alignment Length:1211 Identity:230/1211 - (18%)
Similarity:379/1211 - (31%) Gaps:432/1211 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly   570 SLSSRLIGRFCGSRLPMTNGSVITTQEQVFFWFRSDNQTQGKGFHVIWNSLPFSCGETI--NLTS 632
            :.||...|..|  .|.:.|..:.:.|...|..:.||                :.|.:.:  ....
  Fly    11 AFSSLQFGLLC--LLLLVNNGIKSVQADAFTDYFSD----------------YDCNQPLMERAVL 57

  Fly   633 TQTGVLRSPGYPGQARPELDCRW-QLTAPFGYRLLLRFYDISLGSSEASAGNCSQDS-----LIV 691
            |.|..|...| |.:||...:..| .:...:.:.|.|...|..:....|:.|....|.     ::.
  Fly    58 TATSSLTERG-PDKARLNGNAAWTPVENTYNHFLTLDLGDPRMVRKIATMGRMHTDEFVTEYIVQ 121

  Fly   692 YDSDRQLLRACQSIQPPPVYSSSNSLRLDFHTDAIRSDSSFQMHYEVVPGHPGCGGVYTESRGRI 756
            |..|.:..|:..:....|.....|            ||.: .:||.|                  
  Fly   122 YSDDGEFWRSYVNPTSEPQMFKGN------------SDGN-SIHYNV------------------ 155

  Fly   757 SGYMNFEVCLYL----IEQPRGTQVKLVIDRVSL-VQSLSCHYLKIEI-FDGRSTDAPLLRRICG 815
                 |||.:..    |...|..      ||:|: |:...|.|:...: |:|.......|||   
  Fly   156 -----FEVPIIAQWVRINPTRWH------DRISMRVELYGCDYISENLYFNGTGLVRYDLRR--- 206

  Fly   816 SHEESELEPIISIGNVILVRYEYAL-SGVRLSKSFDLTYTRVCTGNFNTNSGIISTPNYPGPYFD 879
                   |||.|....|..|::.|. :||       :.|:|...|            :|......
  Fly   207 -------EPITSTKESIRFRFKTAFANGV-------MMYSRGTQG------------DYYALQLK 245

  Fly   880 DMTCTYNLTGPLDTAVRMRITDLSLGTANNENDTSYLDVYLSADQKRHIVKSTDNLILLSHSNRA 944
            |.....|    ||...|: :|.||:|:..::|  .:.||.:|.:| |.|:.|.|.:|:       
  Fly   246 DNKMVLN----LDLGSRV-MTSLSVGSLLDDN--VWHDVVISRNQ-RDIIFSVDRVIV------- 295

  Fly   945 SLVFHGSGGGRGMRLEYN------FVPNQCGGFLNEPGRRYVTAVRGTFCQWFIDFPGRKKISIH 1003
                .|...|...||..|      .|||...|.:.:.                 :|.|..:    
  Fly   296 ----RGRIQGEFTRLNLNRELYLGGVPNVQEGLIVQQ-----------------NFSGCLE---- 335

  Fly  1004 TLGPTPSISIYDNSTSPGKLVNSYSGSVGDVFDGDLLT-INLHTNWPRLEIYSIQFDIVQQDSCG 1067
                    :||.|||:..:::.. |..:|   :|.|.| :|.....|...||.:           
  Fly   336 --------NIYFNSTNFIRVMKD-STELG---EGYLFTRVNTIYACPSPPIYPV----------- 377

  Fly  1068 GTFTARFGYIKSPNWPKNYGESQMCEWILRAPFGHRIELVVHNFTLEE-------EYSSTGCWTD 1125
             |||.|..:::.    |.|..||            |:.:..:..|.||       ::.|.|....
  Fly   378 -TFTTRSSFVRL----KGYENSQ------------RLNVSFYFRTYEETGVMLHHDFYSGGYLKV 425

  Fly  1126 WLEIRNGDSESSPLIGRYCGNEIPSRIPSFGNV-LHLKFKS---------DD------------S 1168
            :||                          ||.| :.||.|.         ||            |
  Fly   426 FLE--------------------------FGKVKIDLKVKDKARIILDNYDDQFNDGKWHSFVIS 464

  Fly  1169 MEEKGFLLSWQQMGAGCGGKLSSSMGTIHSPHLLAGNR---GILACDWQIIVAEGSRVSLQLRSN 1230
            :|:...:|:..|........:..:.|   :.:.:||.:   |.:.| .::|..:|:....|....
  Fly   465 IEKNRLILNIDQRPMTTTKSMQVATG---AQYYIAGGKDKNGFVGC-MRLISVDGNYKLPQDWVK 525

  Fly  1231 DNRICSGQLTLYDGPTTASNPIVIRCNGTIAKPLQSTG----NRVLVRYDVGHDAPDGTDFMLNY 1291
            ...:|.|...:.|     :..::.|||   ..|.|..|    |......|.||            
  Fly   526 GEEVCCGDDVVVD-----ACQMIDRCN---PNPCQHKGLCHQNSREFFCDCGH------------ 570

  Fly  1292 QTNCRVRLEGLQGAI-ETPNFP---------ENYPPGQDCEWDIRAGGRKNHLQLIFSHLSVEKF 1346
                    .|..||: .|.|.|         ::.....:...|:...|            .:|.|
  Fly   571 --------TGYAGAVCHTSNNPLSCLALKNVQHVQQRVNLNLDVDGSG------------PLEPF 615

  Fly  1347 SSICLNDYVSLVDMLDDQTLSEQHLCTNDGL-EP------ITTVGNRL---LLRFKSDSSVELQG 1401
            ...|  ::.|...::...:.|::|..|.||. ||      |....|:|   .|..:|.|..:...
  Fly   616 PVTC--EFYSDGRVITTLSHSQEHTTTVDGFQEPGSFEQSIMYDANQLQIEALLNRSHSCWQRLS 678

  Fly  1402 FRAEYKRIGCGEHLRESGGRFESPN-----APFSVDMDCVWIITASEGNQIRLLLHEVYFEAPQI 1461
            :.....|:            |.||:     .|||      |.|  |..||            |. 
  Fly   679 YSCRSSRL------------FNSPSEAGNFRPFS------WWI--SRHNQ------------PM- 710

  Fly  1462 ECRDAESSLSVSAPSGYNSSVVLFRSCHEETQ-------TQTFTSPGNEL---------VIRFVS 1510
                  ...:.:.|........:...||:.|:       :..:...|.::         .::|..
  Fly   711 ------DYWAGALPGSRKCECGILGKCHDPTKWCNCDSNSLEWMEDGGDIREKEYLPVRAVKFGD 769

  Fly  1511 SSAPSRKYFKASFVQVPASCGGYISASSGVLTTPGFHNHQDSKNVANYTSNIECVWTVEVTNGYG 1575
            :..|..:.. ..:...|..|.| ....|.|:|.          .:|:.:.|:             
  Fly   770 TGTPLDEKM-GRYTLGPLRCEG-DDLFSNVVTF----------RIADASINL------------- 809

  Fly  1576 IRPHFEQFNLTDSGNCSVSFVELTKLEPDNKEIFLEKTCGEDSPMIRIVHGRKLRVRFKSQAGTW 1640
                 ..|::..||:..:.|    :...:|..|| ..|...|...:.:..|.||:.::::.:|..
  Fly   810 -----PPFDMGHSGDIYLEF----RTTQENSVIF-HATGPTDYIKLSLNGGNKLQFQYQAGSGPL 864

  Fly  1641 GRFIMYFERQCGGRLSTGEGYLQSRLDEECSWLVTSPEGSK 1681
            |             ::.|..|   .|::. :|...|.|.::
  Fly   865 G-------------VNVGTSY---HLNDN-NWHTVSVERNR 888

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42255NP_729748.3 EGF_CA 156..190 CDD:238011
EGF_CA 192..233 CDD:238011
EGF_CA 290..328 CDD:214542
EGF_CA 330..374 CDD:214542
EGF 427..455 CDD:278437
EGF_CA 462..496 CDD:238011
CUB 503..619 CDD:238001 10/48 (21%)
CUB 624..738 CDD:238001 24/121 (20%)
CUB 745..854 CDD:238001 25/115 (22%)
CUB 857..963 CDD:238001 26/111 (23%)
CUB 1066..1179 CDD:238001 27/141 (19%)
CUB 1185..1293 CDD:238001 21/114 (18%)
CUB 1303..1406 CDD:238001 24/122 (20%)
CUB 1411..1523 CDD:238001 19/132 (14%)
CUB 1530..1648 CDD:238001 21/117 (18%)
CUB 1754..1862 CDD:238001
CUB 1979..2091 CDD:238001
CUB 2096..2193 CDD:294042
CUB 2210..2321 CDD:238001
CUB 2327..2441 CDD:238001
CUB 2688..2782 CDD:294042
CUB 2810..2911 CDD:238001
CUB 3029..3143 CDD:238001
CUB 3169..3249 CDD:294042
CUB 3499..3607 CDD:238001
Nrx-IVNP_524034.2 FA58C 46..185 CDD:214572 34/181 (19%)
FA58C 57..184 CDD:238014 33/169 (20%)
LamG 192..340 CDD:238058 50/224 (22%)
LamG 376..514 CDD:238058 34/195 (17%)
EGF 546..575 CDD:278437 10/51 (20%)
Laminin_G_2 824..943 CDD:280389 17/87 (20%)
EGF_CA 966..998 CDD:238011
Laminin_G_2 1032..1156 CDD:280389
4.1m 1239..1255 CDD:128590
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45444864
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.930

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