DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cubn2 and pcolce2b

DIOPT Version :10

Sequence 1:NP_729748.3 Gene:Cubn2 / 39334 FlyBaseID:FBgn0259140 Length:3613 Species:Drosophila melanogaster
Sequence 2:NP_956754.1 Gene:pcolce2b / 393432 ZFINID:ZDB-GENE-040426-1177 Length:413 Species:Danio rerio


Alignment Length:265 Identity:69/265 - (26%)
Similarity:115/265 - (43%) Gaps:43/265 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   497 SHQRFFCGVTIRGPSGQLH-------YPPNTADGDYQADERCPFIIRTNRNMVLNLTFTQFQLED 554
            |.|.|.||..|.|.||.:.       |||||         :|.:.|......|..|||....||.
Zfish    22 SRQSFTCGGNITGESGVIGSQGYPGVYPPNT---------KCVWRITVPEGKVAVLTFRFLDLES 77

  Fly   555 SADCTADFLQLHDGNSLSSRLIGRFCGSRLPMTNGSVITTQEQVFFWFRSDNQTQGKGFHVIWNS 619
            ...|..|::.::.|:....|| |||||:..|   |::::|..::.....||..|.|.||..::::
Zfish    78 DNLCRYDYVDVYSGHGNGQRL-GRFCGTFRP---GALVSTSNKMLMQMVSDANTAGSGFLAVYSA 138

  Fly   620 LPFS------CGETINLTSTQTGVLRSPGYPGQARPE-LDCRWQLTAPFGYRLLLRF--YDISLG 675
            ...:      ||..:...|   |..::|.:|.:..|. :.|.|.:.||....:.::|  :|:...
Zfish   139 ANPNERGDQYCGGRLMKPS---GSFKTPNWPERDYPAGVTCSWHIVAPKNQIIEVKFEKFDVERD 200

  Fly   676 SSEASAGNCSQDSLIVYDSD-----RQLLRACQSIQPPPVYSSSNSLRLDFHTDAIRSDSSFQMH 735
            :      .|..|.:.:::..     :::.:.|....|.||:|..|.|.:.|.:|...:...|..|
Zfish   201 N------YCRYDYVAIFNGGEINDAKRIGKYCGDTPPAPVFSEGNQLFIQFLSDLSLTADGFIGH 259

  Fly   736 YEVVP 740
            |:..|
Zfish   260 YKFRP 264

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cubn2NP_729748.3 cubilin_NTD 38..141 CDD:412063
EGF_CA 156..190 CDD:238011
EGF_CA 192..233 CDD:238011
EGF_CA 290..328 CDD:214542
EGF_CA 330..374 CDD:214542
EGF 427..455 CDD:394967
EGF_CA 462..496 CDD:238011
CUB 503..619 CDD:238001 38/122 (31%)
CUB 624..738 CDD:238001 27/121 (22%)
CUB 745..854 CDD:238001
CUB 857..963 CDD:238001
CUB 1066..1179 CDD:238001
CUB 1185..1293 CDD:238001
CUB 1303..1406 CDD:238001
CUB 1411..1523 CDD:238001
CUB 1530..1648 CDD:238001
CUB 1754..1862 CDD:238001
CUB 1979..2091 CDD:238001
CUB 2210..2321 CDD:238001
CUB 2327..2441 CDD:238001
CUB 2688..2782 CDD:412131
CUB 2810..2911 CDD:238001
CUB 3029..3143 CDD:238001
CUB 3169..3249 CDD:412131
CUB 3499..3607 CDD:238001
pcolce2bNP_956754.1 CUB 28..138 CDD:238001 38/122 (31%)
CUB 149..260 CDD:395345 25/119 (21%)
NTR_PCOLCE 290..413 CDD:239631
Blue background indicates that the domain is not in the aligned region.

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