DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cubn2 and Cdcp2

DIOPT Version :10

Sequence 1:NP_729748.3 Gene:Cubn2 / 39334 FlyBaseID:FBgn0259140 Length:3613 Species:Drosophila melanogaster
Sequence 2:XP_038967409.1 Gene:Cdcp2 / 298306 RGDID:1563467 Length:566 Species:Rattus norvegicus


Alignment Length:590 Identity:124/590 - (21%)
Similarity:204/590 - (34%) Gaps:162/590 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly  1058 FDIVQQDSCGGTFTARFGYIKSPNWPKNYGESQMCEWILRAPFGHRIELVVHNFTLEEEYSSTGC 1122
            |.:.....|||..:|..|...|||:|..|..:..|.|::....|..:.|..|.|.|  ||..| |
  Rat    48 FSLASGVKCGGVLSAPSGNFSSPNFPSLYPYNTECSWLIVVAEGSSVLLTFHTFDL--EYHDT-C 109

  Fly  1123 WTDWLEIRNGDS-ESSPLIGRYCGNEIPSRIPSFGNVLHLKFKSDDSMEEKGFLLSWQQMGAGCG 1186
            ..|:|||.||.| :...|:||:||...|....|..:|:.:.|.||..:..:||...:|:      
  Rat   110 GFDFLEIYNGASRDKGNLLGRFCGQAPPPPFTSSWHVMSVVFHSDKHVASRGFSAGYQK------ 168

  Fly  1187 GKLSSSMGTIHSPHLLAGNRGILACDWQIIVAEGSRVSLQLRSNDNRICSGQLTLYDGPTTASNP 1251
                                                          .:|.|.||           
  Rat   169 ----------------------------------------------DVCGGVLT----------- 176

  Fly  1252 IVIRCNGTIAKPLQSTGNRVLVRYDVGHDAPDGTDFMLNYQTNCRVRLEGLQGAIETPNFPENYP 1316
                                                             ||.|.:.:|.:|.|||
  Rat   177 -------------------------------------------------GLSGILSSPEYPNNYP 192

  Fly  1317 PGQDCEWDIRAGGRKNHLQLIFSHLSVEKFSSICLNDYVSLVDMLDDQTLSEQHLCTNDGLEPIT 1381
            ...:|.|.|||.|... ::|:|....||. |..|:.|:|:::..  .......|.|.:.....:.
  Rat   193 NNVECHWLIRASGPAT-VKLVFVDFQVEG-SEECMYDHVTVLGA--PGPAHGHHYCGSTRPPTLV 253

  Fly  1382 TVGNRLLLRFKSDSSVELQGFRAEYKRIGCGEHLRESGGRFESPNAP--FSVDMDCVWIITASEG 1444
            ::|:.|.:.||||.::..:||:|.|....|.|......|.|.||..|  :..::.|.|.|....|
  Rat   254 SLGHELQVVFKSDFNIGGRGFKAHYFSGECQEVFTAVRGNFSSPQYPGAYPNNIRCHWTIRLPPG 318

  Fly  1445 NQIRLLLHEVYFEAPQIECRDAESSLSVSAPSGYNSSVVLFRSCHEETQTQTFTSPGNELVIRFV 1509
            .::::.:.::..|.|....|..:.....:.......:.:|.:.|........ ||..|:|::...
  Rat   319 YRVKVFVLDLGLEEPNSLTRTCDFDHLAAFDGASEEAKLLGKWCGHHLPPPV-TSSHNQLLLLLH 382

  Fly  1510 SSSAPSRKYFKASFVQV---PASCGG-----YISASSGVLTTPGFHNHQDSKNVANYTSNIECVW 1566
            :..:.|.:.|..:::.|   ..||..     .|||.:   ..|       .:....|..:..|. 
  Rat   383 TDRSTSGRGFSVAYIGVVPMNVSCSRTDFQILISAQA---LAP-------LERTKVYLGSRSCA- 436

  Fly  1567 TVEVTNGYGIRPHFE-------------------QFNLTDSGNCSVSFVELTKLEPDNKEIFLEK 1612
            ..||.:.:.|:..|:                   ..:.:.:|:..:...|: :.||..||..:..
  Rat   437 AQEVGSNFRIQARFDTCGSESQRRNNTSVIVSVLYLDFSAAGHSDIHEYEV-RCEPRRKEASVHL 500

  Fly  1613 TCGED 1617
            ..|.|
  Rat   501 LSGSD 505

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cubn2NP_729748.3 cubilin_NTD 38..141 CDD:412063
EGF_CA 156..190 CDD:238011
EGF_CA 192..233 CDD:238011
EGF_CA 290..328 CDD:214542
EGF_CA 330..374 CDD:214542
EGF 427..455 CDD:394967
EGF_CA 462..496 CDD:238011
CUB 503..619 CDD:238001
CUB 624..738 CDD:238001
CUB 745..854 CDD:238001
CUB 857..963 CDD:238001
CUB 1066..1179 CDD:238001 41/113 (36%)
CUB 1185..1293 CDD:238001 4/107 (4%)
CUB 1303..1406 CDD:238001 31/102 (30%)
CUB 1411..1523 CDD:238001 22/113 (19%)
CUB 1530..1648 CDD:238001 19/112 (17%)
CUB 1754..1862 CDD:238001
CUB 1979..2091 CDD:238001
CUB 2210..2321 CDD:238001
CUB 2327..2441 CDD:238001
CUB 2688..2782 CDD:412131
CUB 2810..2911 CDD:238001
CUB 3029..3143 CDD:238001
CUB 3169..3249 CDD:412131
CUB 3499..3607 CDD:238001
Cdcp2XP_038967409.1 CUB 56..167 CDD:238001 41/113 (36%)
CUB 171..280 CDD:238001 38/172 (22%)
CUB 283..396 CDD:238001 22/113 (19%)
Blue background indicates that the domain is not in the aligned region.

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