DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cubn2 and Cdcp2

DIOPT Version :10

Sequence 1:NP_729748.3 Gene:Cubn2 / 39334 FlyBaseID:FBgn0259140 Length:3613 Species:Drosophila melanogaster
Sequence 2:XP_030109426.1 Gene:Cdcp2 / 242603 MGIID:3045328 Length:540 Species:Mus musculus


Alignment Length:581 Identity:125/581 - (21%)
Similarity:199/581 - (34%) Gaps:160/581 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly  1066 CGGTFTARFGYIKSPNWPKNYGESQMCEWILRAPFGHRIELVVHNFTLEEEYSSTGCWTDWLEIR 1130
            |||..:|..|...|||:|..|..:..|.|::....|..:.|..|.|.|  ||..| |..|:|||.
Mouse    30 CGGVLSAPSGNFSSPNFPSLYPYNTECSWLIVVAEGSSVLLTFHAFDL--EYHDT-CGFDFLEIY 91

  Fly  1131 NGDS-ESSPLIGRYCGNEIPSRIPSFGNVLHLKFKSDDSMEEKGFLLSWQQMGAGCGGKLSSSMG 1194
            ||.| :...|:||:||...|....|..:|:.:.|.||..:..:||...:|:              
Mouse    92 NGASGDKGNLLGRFCGQVPPPPFTSSWHVMSVVFHSDKHVASRGFSAGYQK-------------- 142

  Fly  1195 TIHSPHLLAGNRGILACDWQIIVAEGSRVSLQLRSNDNRICSGQLTLYDGPTTASNPIVIRCNGT 1259
                                                  .:|.|.||                   
Mouse   143 --------------------------------------DVCGGVLT------------------- 150

  Fly  1260 IAKPLQSTGNRVLVRYDVGHDAPDGTDFMLNYQTNCRVRLEGLQGAIETPNFPENYPPGQDCEWD 1324
                                                     ||.|.:.:|.:|.|||...:|.|.
Mouse   151 -----------------------------------------GLSGVLSSPEYPNNYPNNVECHWL 174

  Fly  1325 IRAGGRKNHLQLIFSHLSVEKFSSICLNDYVSLVDMLDDQTLSEQHLCTNDGLEPITTVGNRLLL 1389
            |||.| ...::|:|....||. |..|:.|||:::..  .......|.|.........::|:.|.:
Mouse   175 IRASG-PAAVKLVFVDFQVEG-SDECMYDYVAVLGA--PGPAHGHHYCGRTRPPTFVSLGHELQV 235

  Fly  1390 RFKSDSSVELQGFRAEYKRIGCGEHLRESGGRFESPNAP--FSVDMDCVWIITASEGNQIRLLLH 1452
            .||||.::..:||:|.|....|.|......|.|.||..|  :..::.|.|.|....|.::::.:.
Mouse   236 VFKSDFNIGGRGFKAHYFSGECQEVFTAVRGNFSSPQYPGAYPNNIRCHWTIRLPPGYRVKVFIL 300

  Fly  1453 EVYFEAPQIECRDAESSLSVSAPSGYNSSVVLFRSCHEETQTQTFTSPGNELVIRFVSSSAPSRK 1517
            ::..|.|....|..:.....:.......:.:|.:.|........ ||..|::::...:..:.|.:
Mouse   301 DLGLEEPNSLTRTCDFDHLAAFDGASEEAQLLGKWCGHHLPPPV-TSSRNQVLLLLHTDRSTSGR 364

  Fly  1518 YFKASFVQV---PASCGG-----YISASSGVLTTPGFHNHQDSKNVANYTSNIECVWTVEVTNGY 1574
            .|..:::.|   ..||..     .|||.:   ..|       .:....|..:..|. ..||.:.:
Mouse   365 GFSVAYIGVVPMNVSCSRTDFQILISAQA---LAP-------LERTKVYLGSRSCA-AQEVGSNF 418

  Fly  1575 GIRPHFE------QFNLTDSGNCSVSFVELT------------KLEPDNKEIFLEKTCGED 1617
            .|:..|:      |.....|...||.:::.:            :.||..||.......|.|
Mouse   419 RIQARFDTCGTESQRRNNTSVIVSVLYIDFSTAGHDDIHEYEVRCEPRRKEASAHLLSGSD 479

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cubn2NP_729748.3 cubilin_NTD 38..141 CDD:412063
EGF_CA 156..190 CDD:238011
EGF_CA 192..233 CDD:238011
EGF_CA 290..328 CDD:214542
EGF_CA 330..374 CDD:214542
EGF 427..455 CDD:394967
EGF_CA 462..496 CDD:238011
CUB 503..619 CDD:238001
CUB 624..738 CDD:238001
CUB 745..854 CDD:238001
CUB 857..963 CDD:238001
CUB 1066..1179 CDD:238001 41/113 (36%)
CUB 1185..1293 CDD:238001 4/107 (4%)
CUB 1303..1406 CDD:238001 32/102 (31%)
CUB 1411..1523 CDD:238001 21/113 (19%)
CUB 1530..1648 CDD:238001 21/111 (19%)
CUB 1754..1862 CDD:238001
CUB 1979..2091 CDD:238001
CUB 2210..2321 CDD:238001
CUB 2327..2441 CDD:238001
CUB 2688..2782 CDD:412131
CUB 2810..2911 CDD:238001
CUB 3029..3143 CDD:238001
CUB 3169..3249 CDD:412131
CUB 3499..3607 CDD:238001
Cdcp2XP_030109426.1 CUB 30..141 CDD:238001 41/113 (36%)
CUB 145..254 CDD:238001 39/172 (23%)
CUB 257..370 CDD:238001 21/113 (19%)
Blue background indicates that the domain is not in the aligned region.

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