DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cubn2 and CDCP2

DIOPT Version :10

Sequence 1:NP_729748.3 Gene:Cubn2 / 39334 FlyBaseID:FBgn0259140 Length:3613 Species:Drosophila melanogaster
Sequence 2:NP_001340584.1 Gene:CDCP2 / 200008 HGNCID:27297 Length:540 Species:Homo sapiens


Alignment Length:474 Identity:107/474 - (22%)
Similarity:172/474 - (36%) Gaps:123/474 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly  1056 IQFDIVQQDSCGGTFTARFGYIKSPNWPKNYGESQMCEWILRAPFGHRIELVVHNFTLEEEYSST 1120
            :|...::...|||..:|..|...|||:|:.|..:..|.|::....|..:.|..|.|.|  ||..|
Human    20 LQAQAMEGVKCGGVLSAPSGNFSSPNFPRLYPYNTECSWLIVVAEGSSVLLTFHAFDL--EYHDT 82

  Fly  1121 GCWTDWLEIRNGDS-ESSPLIGRYCGNEIPSRIPSFGNVLHLKFKSDDSMEEKGFLLSWQQMGAG 1184
             |..|:|||.||.| :...|:||:||...|....|..:|:.:.|.||..:...||...:|:    
Human    83 -CSFDFLEIYNGASPDKGNLLGRFCGKVPPPPFTSSWHVMSVIFHSDKHVASHGFSAGYQK---- 142

  Fly  1185 CGGKLSSSMGTIHSPHLLAGNRGILACDWQIIVAEGSRVSLQLRSNDNRICSGQLTLYDGPTTAS 1249
                                                            .:|.|.||         
Human   143 ------------------------------------------------DVCGGVLT--------- 150

  Fly  1250 NPIVIRCNGTIAKPLQSTGNRVLVRYDVGHDAPDGTDFMLNYQTNCRVRLEGLQGAIETPNFPEN 1314
                                                               ||.|.:.:|.:|.|
Human   151 ---------------------------------------------------GLSGVLTSPEYPNN 164

  Fly  1315 YPPGQDCEWDIRAGGRKNHLQLIFSHLSVEKFSSICLNDYVSLVDMLDDQTLSEQHLCTNDGLEP 1379
            ||...:|.|.|||.| ..|::|:|....||. :..|..|||:::.  ........|.|.:.....
Human   165 YPNSMECHWVIRAAG-PAHVKLVFVDFQVEG-NEECTYDYVAVLG--GPGPTRGHHYCGSTRPPT 225

  Fly  1380 ITTVGNRLLLRFKSDSSVELQGFRAEYKRIGCGEHLRESGGRFESPNAPFSV--DMDCVWIITAS 1442
            :.::|:.|.:.||||.::..:||:|.|....|.|......|.|.||..|.|.  ::.|.|.|...
Human   226 LVSLGHELQVVFKSDFNIGGRGFKAYYFSGECQEVYMAMRGNFSSPQYPSSYPNNIRCHWTIRLP 290

  Fly  1443 EGNQIRLLLHEVYFEAPQIECRDAESSLSVSAPSGYNSSVVLFRSCHEETQTQTFTSPGNELVIR 1507
            .|.|:::...::..|.|....:..:.. .::|..|.:....|..:..........||..|:|::.
Human   291 PGYQVKVFFLDLDLEEPNSLTKTCDFD-HLAAFDGASEEAPLLGNWCGHHLPPPVTSSHNQLLLL 354

  Fly  1508 FVSSSAPSRKYFKASFVQV 1526
            ..:..:.:|:.|..:::.|
Human   355 LHTDRSTTRRGFSVAYIGV 373

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cubn2NP_729748.3 cubilin_NTD 38..141 CDD:412063
EGF_CA 156..190 CDD:238011
EGF_CA 192..233 CDD:238011
EGF_CA 290..328 CDD:214542
EGF_CA 330..374 CDD:214542
EGF 427..455 CDD:394967
EGF_CA 462..496 CDD:238011
CUB 503..619 CDD:238001
CUB 624..738 CDD:238001
CUB 745..854 CDD:238001
CUB 857..963 CDD:238001
CUB 1066..1179 CDD:238001 41/113 (36%)
CUB 1185..1293 CDD:238001 4/107 (4%)
CUB 1303..1406 CDD:238001 32/102 (31%)
CUB 1411..1523 CDD:238001 24/113 (21%)
CUB 1530..1648 CDD:238001
CUB 1754..1862 CDD:238001
CUB 1979..2091 CDD:238001
CUB 2210..2321 CDD:238001
CUB 2327..2441 CDD:238001
CUB 2688..2782 CDD:412131
CUB 2810..2911 CDD:238001
CUB 3029..3143 CDD:238001
CUB 3169..3249 CDD:412131
CUB 3499..3607 CDD:238001
CDCP2NP_001340584.1 CUB 30..141 CDD:238001 41/113 (36%)
CUB 145..254 CDD:238001 39/172 (23%)
CUB 257..370 CDD:395345 24/113 (21%)
Blue background indicates that the domain is not in the aligned region.

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