DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cubn2 and nas-30

DIOPT Version :10

Sequence 1:NP_729748.3 Gene:Cubn2 / 39334 FlyBaseID:FBgn0259140 Length:3613 Species:Drosophila melanogaster
Sequence 2:NP_490795.5 Gene:nas-30 / 190803 WormBaseID:WBGene00003548 Length:741 Species:Caenorhabditis elegans


Alignment Length:453 Identity:99/453 - (21%)
Similarity:143/453 - (31%) Gaps:174/453 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly   973 NEPGRRYVTAVRGTFCQWFIDFPGRKKISIHTLGPTPSISIYDNSTSPGKLVNSYSGSVG----- 1032
            |.||:.||...||:.|.          .|:...|.:..|||.......|.:.:....|:|     
 Worm   370 NGPGKDYVIFFRGSGCY----------SSVGRTGGSQLISIGYGCEDKGIVAHEVGHSLGFWHEQ 424

  Fly  1033 ---DVFDGDLLTINLHTNWPRLEIYSIQFDIVQQDSCGGTFTAR-FGYIKSPNWPKNYGESQMCE 1093
               |..|    .|:|..:|           |::  ...|.|..| :..|:....|.:.|.     
 Worm   425 SRPDRDD----YIHLRKDW-----------IIK--GTDGNFEKRSWEEIEDMGVPYDVGS----- 467

  Fly  1094 WILRAPFGHRIELVVHNFTLEEEYSSTGCWTDW--LEIRNGDSESSPLIGR-------------- 1142
                         |:|       |.|.....||  :.|...||.....||:              
 Worm   468 -------------VMH-------YGSNAFTKDWDQITIETKDSRYQGTIGQRQKLSFIDVKQVNR 512

  Fly  1143 -YCGNEIPSRIPSFGNVLHLKF---------KSDDSMEEKGFLLSWQQMGAGCGGKL--SSSMGT 1195
             ||.:..|..:|    .:|..:         |..|                |.||||  .::.||
 Worm   513 LYCNSVCPVALP----CMHGGYPDPNNCAVCKCPD----------------GLGGKLCGRAAKGT 557

  Fly  1196 IHSP---HLLAG-------NRGILACDWQIIVAEGSRVSL---QLRSNDNRICSGQLTLYDGPTT 1247
            .|..   .|.|.       .:|...|:|::....|.||.|   :||..    |:.....|     
 Worm   558 DHDKCGGELTATAEWQEMVYKGKRTCNWKVKSPSGGRVRLVLTELRYQ----CAPACKAY----- 613

  Fly  1248 ASNPIVIRCNGTIAKPLQSTGNRVLV---RYDVGHDAPDG--------TDFMLNYQTNCRVRLEG 1301
                |.|:.|    ...|.||.||..   .|||..|..:.        .|:.::|      :|:.
 Worm   614 ----IEIKHN----TDFQQTGFRVCCFNKTYDVISDQSEALILSNANIVDYEVSY------KLQW 664

  Fly  1302 LQG---AIETPNFPENYPPGQD------CEWDIRAGG--RKNHLQLI----FSHLSVEKFSSI 1349
            :|.   |:..|.....:.||::      .|   .:||  .|..||.|    .||..:|..:||
 Worm   665 IQDNGKALPPPKPTSTWVPGKENRPFRGVE---NSGGTIEKFILQAIPKIRDSHRPLESITSI 724

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cubn2NP_729748.3 cubilin_NTD 38..141 CDD:412063
EGF_CA 156..190 CDD:238011
EGF_CA 192..233 CDD:238011
EGF_CA 290..328 CDD:214542
EGF_CA 330..374 CDD:214542
EGF 427..455 CDD:394967
EGF_CA 462..496 CDD:238011
CUB 503..619 CDD:238001
CUB 624..738 CDD:238001
CUB 745..854 CDD:238001
CUB 857..963 CDD:238001
CUB 1066..1179 CDD:238001 24/139 (17%)
CUB 1185..1293 CDD:238001 34/133 (26%)
CUB 1303..1406 CDD:238001 17/62 (27%)
CUB 1411..1523 CDD:238001
CUB 1530..1648 CDD:238001
CUB 1754..1862 CDD:238001
CUB 1979..2091 CDD:238001
CUB 2210..2321 CDD:238001
CUB 2327..2441 CDD:238001
CUB 2688..2782 CDD:412131
CUB 2810..2911 CDD:238001
CUB 3029..3143 CDD:238001
CUB 3169..3249 CDD:412131
CUB 3499..3607 CDD:238001
nas-30NP_490795.5 ZnMc_astacin_like 336..514 CDD:239807 39/195 (20%)
CUB 564..648 CDD:412131 25/100 (25%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.