DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cubn2 and nas-22

DIOPT Version :10

Sequence 1:NP_729748.3 Gene:Cubn2 / 39334 FlyBaseID:FBgn0259140 Length:3613 Species:Drosophila melanogaster
Sequence 2:NP_505908.2 Gene:nas-22 / 188423 WormBaseID:WBGene00003541 Length:367 Species:Caenorhabditis elegans


Alignment Length:174 Identity:40/174 - (22%)
Similarity:57/174 - (32%) Gaps:68/174 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly   432 CQNNGTCVQNGRGTTCICQPGYSGVVCNSSDACHPSPCLNGGTCRLLPDAKYQCVCPRGYTGTTC 496
            |.||.:|..:|                      :|:|    ..|.       ||.||.|:.|..|
 Worm   238 CANNLSCKNHG----------------------YPNP----SNCS-------QCNCPYGFGGADC 269

  Fly   497 SHQRFFCGVTIRGPSGQLHYPPNTADGDYQADERCPFIIRTNRNMVLNLTFTQFQLEDS-----A 556
            | ||...|.|                  :||.|       |.:|:.::|......||::     .
 Worm   270 S-QRAEPGAT------------------FQATE-------TWQNVTISLDAGYRYLENNQKLPQV 308

  Fly   557 DCTADFLQ-LHDGNSLSSRLIGRFC-GSRLP--MTNGSVITTQE 596
            |....||. :...|..:...:.:|. |..||  :..|..|.|.|
 Worm   309 DFIYQFLWIMAPANKTTQIRVEKFVEGKCLPGCIRGGVEIKTNE 352

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cubn2NP_729748.3 cubilin_NTD 38..141 CDD:412063
EGF_CA 156..190 CDD:238011
EGF_CA 192..233 CDD:238011
EGF_CA 290..328 CDD:214542
EGF_CA 330..374 CDD:214542
EGF 427..455 CDD:394967 5/22 (23%)
EGF_CA 462..496 CDD:238011 9/33 (27%)
CUB 503..619 CDD:238001 22/103 (21%)
CUB 624..738 CDD:238001
CUB 745..854 CDD:238001
CUB 857..963 CDD:238001
CUB 1066..1179 CDD:238001
CUB 1185..1293 CDD:238001
CUB 1303..1406 CDD:238001
CUB 1411..1523 CDD:238001
CUB 1530..1648 CDD:238001
CUB 1754..1862 CDD:238001
CUB 1979..2091 CDD:238001
CUB 2210..2321 CDD:238001
CUB 2327..2441 CDD:238001
CUB 2688..2782 CDD:412131
CUB 2810..2911 CDD:238001
CUB 3029..3143 CDD:238001
CUB 3169..3249 CDD:412131
CUB 3499..3607 CDD:238001
nas-22NP_505908.2 ZnMc 56..234 CDD:469599
Blue background indicates that the domain is not in the aligned region.

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