DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cubn2 and nas-19

DIOPT Version :10

Sequence 1:NP_729748.3 Gene:Cubn2 / 39334 FlyBaseID:FBgn0259140 Length:3613 Species:Drosophila melanogaster
Sequence 2:NP_505893.2 Gene:nas-19 / 186926 WormBaseID:WBGene00003538 Length:396 Species:Caenorhabditis elegans


Alignment Length:142 Identity:33/142 - (23%)
Similarity:54/142 - (38%) Gaps:40/142 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   163 CKNGG-----TCHDAYKGFQCECPAGWQGDSCEDDVNECFTLAGTDLDGCLNNGQCINTPGSYRC 222
            |||||     .|.      :|.||.|:.|:.|::...:.:.|...:     |..|.|..|.:|:.
 Worm   238 CKNGGYTSPSDCS------RCNCPKGFFGNLCDERQQDSYELMAVN-----NLWQSITIPFAYKP 291

  Fly   223 -VCRNGFTGTHCRLRHNTCLFGGSRELCGEHGTCIQAANSAGYVCICDQGWT--------WADAN 278
             ...:||        ::|.::     :.|:..:.|:.........||..|.|        ..|:.
 Worm   292 EPGSDGF--------YSTFVY-----ITGKANSTIEITLEGLQDVICTAGCTVNGVEIKFKEDSK 343

  Fly   279 VTSASPSACVRD 290
            :|  ||..|..|
 Worm   344 IT--SPVVCCTD 353

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cubn2NP_729748.3 cubilin_NTD 38..141 CDD:412063
EGF_CA 156..190 CDD:238011 11/31 (35%)
EGF_CA 192..233 CDD:238011 8/41 (20%)
EGF_CA 290..328 CDD:214542 1/1 (100%)
EGF_CA 330..374 CDD:214542
EGF 427..455 CDD:394967
EGF_CA 462..496 CDD:238011
CUB 503..619 CDD:238001
CUB 624..738 CDD:238001
CUB 745..854 CDD:238001
CUB 857..963 CDD:238001
CUB 1066..1179 CDD:238001
CUB 1185..1293 CDD:238001
CUB 1303..1406 CDD:238001
CUB 1411..1523 CDD:238001
CUB 1530..1648 CDD:238001
CUB 1754..1862 CDD:238001
CUB 1979..2091 CDD:238001
CUB 2210..2321 CDD:238001
CUB 2327..2441 CDD:238001
CUB 2688..2782 CDD:412131
CUB 2810..2911 CDD:238001
CUB 3029..3143 CDD:238001
CUB 3169..3249 CDD:412131
CUB 3499..3607 CDD:238001
nas-19NP_505893.2 Astacin 48..230 CDD:426242
Blue background indicates that the domain is not in the aligned region.

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