DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cubn2 and nas-28

DIOPT Version :10

Sequence 1:NP_729748.3 Gene:Cubn2 / 39334 FlyBaseID:FBgn0259140 Length:3613 Species:Drosophila melanogaster
Sequence 2:NP_498342.3 Gene:nas-28 / 185658 WormBaseID:WBGene00003546 Length:497 Species:Caenorhabditis elegans


Alignment Length:385 Identity:65/385 - (16%)
Similarity:123/385 - (31%) Gaps:153/385 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly   582 SRLPMTNGSVITTQEQVFFW-------FRSDNQTQGKGF----HVIWN------SLPF---SCGE 626
            ::|..||  :...::.:.||       |:.||..:.:.|    ...|:      .:|:   |.|.
 Worm   142 TKLSATN--IANVRKAIQFWNDNSCLSFKEDNNAKNRLFLSSAGGCWSYVGKQVDMPYQMVSVGP 204

  Fly   627 TINLTSTQT-GVLRSPGY---------------------PGQA----RPELDCRWQLTAPFGYRL 665
            ..:...|.| .::.:.|:                     |.||    :..:|....|..|:.|..
 Worm   205 NCDTFGTATHELMHAIGFWHQQSRADRDNYVYVDFSNIIPSQAYNFQKMAVDQAQLLNLPYDYGS 269

  Fly   666 LLRFYDI--------------------SLGSSEASA----------GNCSQDSLI--------VY 692
            ::::|..                    |:|..||.|          .||:....|        :.
 Worm   270 VMQYYPYAFAVDSSKYTILAKENGFQNSMGQREAPAFSDIIGVNKLYNCTSQCKIQMKCSNCGIT 334

  Fly   693 DSDRQLLRACQSIQPPPVYSSSNSLRLDFHTDAIRSDSSFQMHYEVVPGHPGCGGVYTESRGRIS 757
            ||     |.|...:.|..::.::       .|::.|.::           |.|.|...::   .|
 Worm   335 DS-----RNCNQCKCPRYFTGAS-------CDSLPSGTA-----------PNCNGAVLQA---TS 373

  Fly   758 GYMNFEV-----------------CLYLIEQPRGTQVKLVIDRVSLV---------QSLSCHYLK 796
            .:..|:.                 |.:.|:.|.|.|::..:.:..|.         ||:..:..|
 Worm   374 SWETFDAKAGDPSSFSSSTDNSTNCYWHIKAPEGQQIEFKMTKTPLAAICMQECPWQSIEVNLGK 438

  Fly   797 IEIFDGRSTDAPLLRRICGSHEESELEPIISIGNVILVRYEYALSGVRLSKSFDLTYTRV 856
            .::|...:....:|.::.    .|||..|...|   ::||.        ..:|.:.|..|
 Worm   439 FDLFGMITCCDTILNQVF----TSELNMIALRG---IIRYN--------QLTFSIQYRAV 483

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cubn2NP_729748.3 cubilin_NTD 38..141 CDD:412063
EGF_CA 156..190 CDD:238011
EGF_CA 192..233 CDD:238011
EGF_CA 290..328 CDD:214542
EGF_CA 330..374 CDD:214542
EGF 427..455 CDD:394967
EGF_CA 462..496 CDD:238011
CUB 503..619 CDD:238001 10/53 (19%)
CUB 624..738 CDD:238001 27/177 (15%)
CUB 745..854 CDD:238001 23/134 (17%)
CUB 857..963 CDD:238001 65/385 (17%)
CUB 1066..1179 CDD:238001
CUB 1185..1293 CDD:238001
CUB 1303..1406 CDD:238001
CUB 1411..1523 CDD:238001
CUB 1530..1648 CDD:238001
CUB 1754..1862 CDD:238001
CUB 1979..2091 CDD:238001
CUB 2210..2321 CDD:238001
CUB 2327..2441 CDD:238001
CUB 2688..2782 CDD:412131
CUB 2810..2911 CDD:238001
CUB 3029..3143 CDD:238001
CUB 3169..3249 CDD:412131
CUB 3499..3607 CDD:238001
nas-28NP_498342.3 ZnMc_astacin_like 135..316 CDD:239807 29/175 (17%)
CUB 393..480 CDD:214483 19/101 (19%)
Blue background indicates that the domain is not in the aligned region.

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