DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG42255 and nas-38

DIOPT Version :9

Sequence 1:NP_729748.3 Gene:CG42255 / 39334 FlyBaseID:FBgn0259140 Length:3613 Species:Drosophila melanogaster
Sequence 2:NP_001359993.1 Gene:nas-38 / 180407 WormBaseID:WBGene00003554 Length:727 Species:Caenorhabditis elegans


Alignment Length:718 Identity:150/718 - (20%)
Similarity:229/718 - (31%) Gaps:239/718 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly  1976 TGGCTKELTLSH-----HGDIELS-----------------------SPGYPHGYAPNLNCEWTI 2012
            ||....||.:::     .||::||                       :|.|.         :|..
 Worm    71 TGVHHDELAVNNADEYFQGDVDLSEQQVKIIEDQFTQGKREKRKIGRNPLYK---------KWDT 126

  Fly  2013 RSQFPSHHIYAHSIIVDLEDYPACSADYLSIQSSRD-LIKWKNELHACKASQIAPVHGTPYL-RL 2075
            |.  |....||.||            .:.:.|..|. ::.|:.  |.|...:    .|.|.: ||
 Worm   127 RG--PISFDYAESI------------PFQTRQKIRSAMLLWQQ--HTCLRFE----EGGPNVDRL 171

  Fly  2076 QFRSDVSINGTG---FRAKLRTSCGSNMT----GIVGTIPQENLFDECAWHIDVRPGRKIDIAIN 2133
            :|     .:|.|   |..::..:.|.:::    .:||.|..|.......:|...||.::..||||
 Worm   172 EF-----FDGGGCSSFVGRVGGTQGISISTPGCDVVGIISHEIGHALGIFHEQARPDQERHIAIN 231

  Fly  2134 YNNMPPI------AV----CEAYGLIYDGVDEHASLLEHTRFG--------NQMGIRRTQFRTSG 2180
            |||:|..      ||    .|.|.|.||    ..|::.:..:|        ....:.|.|..|.|
 Worm   232 YNNIPLSRWNNFQAVGENHAETYNLPYD----TGSVMHYGPYGFASDPYTPTIRTLERVQQSTIG 292

  Fly  2181 SHA----------YIKYHIGRSRINGLCLWN-----------------------LTYREFNECNG 2212
            ..|          .:.|....|..:..||.|                       ..|....:|.|
 Worm   293 QRAGPSFLDYQAINMAYGCTESCADLPCLRNGYTHPNNCSMCACPEGLSGRYCEQVYPSNAQCGG 357

  Fly  2213 EIQLNQQAPNYTIMSPGYPYLPHPHAECTWLVMAPPGETIAVDFDEQFE-LSARHCDKENVEF-- 2274
            .|...::....|  ||.||.......||.|::.||....:.::|:..|: |....|||..||.  
 Worm   358 VIFATKEVKYIT--SPNYPDKFPIDTECNWIIAAPIEGRVFMEFEGDFDFLCEDTCDKAYVEVKY 420

  Fly  2275 -----FDGATKLARLLLRTCRKPQNT--------------VRTTGNLLLVHYQSQLNEPTGGFRL 2320
                 ..||.....||      |:|.              .|::|......:.|.|.||.|    
 Worm   421 HSDKRLTGARYCCSLL------PKNRFISFKNEMIIIMRGYRSSGAGFKAKFWSNLGEPEG---- 475

  Fly  2321 NLSLSTCGGQFSASAGFISSENYPHLGGYPKP----SVCEYSILLP-----KNAFIRLNITDLHL 2376
               :||.....:|....||.....     |:|    |...|:..:|     |..|.|..||   :
 Worm   476 ---VSTPLPPTTAPLPEISETTQK-----PEPTTVQSTTTYTTAIPRRTAKKQFFTRKPIT---I 529

  Fly  2377 PYDANGTSSDRLEIVDYEDRTQKLMVL-------DGRTK--------------TSILFTLNTNAA 2420
            |.....:||...|.......||....|       .|.|:              ::||..:|:.|.
 Worm   530 PLTPLTSSSTTTESTTVSSTTQSTTWLPTEPSFATGETEITTASPTITLFPSLSTILPPINSLAG 594

  Fly  2421 TIRFVAVQNVNNYRGFKI------RYERYVGTCSRDINGASGDIVIPPMPQSVWLRFCRLRI--- 2476
            .:......::.|    .:      .:..:.|.||:...|..         ..:..|.|:...   
 Worm   595 VLPSTQAPDIIN----SVLECGCGAWSEWQGECSQQCGGCG---------HRLRKRECKKEACRK 646

  Fly  2477 ---------SVPKGQRVRLNLLNLSNIRVVKRN---DTNRSFMQIGRLESMAHFSFYNDANSLSK 2529
                     :.|.|...   |:|.:...::.|.   ...||..|...||:.:: .|:...|||..
 Worm   647 EEKRPCNFSACPDGTNF---LINNAEFHILWRGCCVGLFRSGDQCSALETESN-PFFKIINSLLN 707

  Fly  2530 IAE 2532
            |.:
 Worm   708 IQD 710

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42255NP_729748.3 EGF_CA 156..190 CDD:238011
EGF_CA 192..233 CDD:238011
EGF_CA 290..328 CDD:214542
EGF_CA 330..374 CDD:214542
EGF 427..455 CDD:278437
EGF_CA 462..496 CDD:238011
CUB 503..619 CDD:238001
CUB 624..738 CDD:238001
CUB 745..854 CDD:238001
CUB 857..963 CDD:238001
CUB 1066..1179 CDD:238001
CUB 1185..1293 CDD:238001
CUB 1303..1406 CDD:238001
CUB 1411..1523 CDD:238001
CUB 1530..1648 CDD:238001
CUB 1754..1862 CDD:238001
CUB 1979..2091 CDD:238001 28/144 (19%)
CUB 2096..2193 CDD:294042 31/128 (24%)
CUB 2210..2321 CDD:238001 34/132 (26%)
CUB 2327..2441 CDD:238001 27/149 (18%)
CUB 2688..2782 CDD:294042
CUB 2810..2911 CDD:238001
CUB 3029..3143 CDD:238001
CUB 3169..3249 CDD:294042
CUB 3499..3607 CDD:238001
nas-38NP_001359993.1 Astacin 122..313 CDD:366617 51/228 (22%)
CUB 367..466 CDD:214483 26/106 (25%)
TSP1 613..658 CDD:214559 6/53 (11%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3714
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

Return to query results.
Submit another query.