DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cubn2 and nas-25

DIOPT Version :10

Sequence 1:NP_729748.3 Gene:Cubn2 / 39334 FlyBaseID:FBgn0259140 Length:3613 Species:Drosophila melanogaster
Sequence 2:NP_495880.1 Gene:nas-25 / 174412 WormBaseID:WBGene00003544 Length:399 Species:Caenorhabditis elegans


Alignment Length:334 Identity:65/334 - (19%)
Similarity:97/334 - (29%) Gaps:136/334 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 LVFCLQFPHSNTSRDNLEKRAHLVRQSNDNL------LLEP-AWDRNVSL---RLMGESATVTIN 66
            |:..:...|:. ||.:..:...::.|:.||.      ||.| .|...|..   .:|..||....|
 Worm   136 LMHAIGIEHTQ-SRSDRNRYLDILAQNIDNRDLPNFELLSPRLWANLVPYDYGSVMHYSADSFSN 199

  Fly    67 DVDMMTVLRRRQRIIADRQAARREPLKVDAVRDMFHDVELKMTRIQRRIFSARNSTKRSGLNQRI 131
            ..|..|:|.:.:..|.          .:.::...|:|.: ::.:..:...|.||           
 Worm   200 KDDEQTMLPKDRSFIE----------TMGSMIPNFYDFD-QINQYYQCYDSCRN----------- 242

  Fly   132 LRRQLQRVERVKGILQTLAGNLARNECLSNPCKNGG-----TCHDAYKGFQCECPAGWQGDSCED 191
                              ||.||.       |.|||     .|.      .|.||.|:.||.|:.
 Worm   243 ------------------AGQLAN-------CANGGIPNPNNCQ------VCNCPMGYGGDLCDQ 276

  Fly   192 DVNEC-FTLAGTD--------LDGCLNNGQCINTPGSYRCVCRNGFTG------------THCRL 235
            ....| .||..||        :....|:.|       |...|.:...|            |...:
 Worm   277 RPEGCGSTLVATDRWQKQKLSVRFSRNDDQ-------YFTFCNSWIVGPSDRTLQVIYEITSDSI 334

  Fly   236 RHNTCLFGGSRELCGEHGTCIQAANSAGYVCICDQGWTWADANVTSASPSACVRDVDECEPRVNP 300
            |...|.||     |.|.|..::...                                  :||:..
 Worm   335 RRQICSFG-----CYEGGIEVKHLQ----------------------------------DPRITN 360

  Fly   301 CHDECINLP 309
            ..|.|:|.|
 Worm   361 DRDCCLNTP 369

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cubn2NP_729748.3 cubilin_NTD 38..141 CDD:412063 20/112 (18%)
EGF_CA 156..190 CDD:238011 11/38 (29%)
EGF_CA 192..233 CDD:238011 11/61 (18%)
EGF_CA 290..328 CDD:214542 6/20 (30%)
EGF_CA 330..374 CDD:214542
EGF 427..455 CDD:394967
EGF_CA 462..496 CDD:238011
CUB 503..619 CDD:238001
CUB 624..738 CDD:238001
CUB 745..854 CDD:238001
CUB 857..963 CDD:238001
CUB 1066..1179 CDD:238001
CUB 1185..1293 CDD:238001
CUB 1303..1406 CDD:238001
CUB 1411..1523 CDD:238001
CUB 1530..1648 CDD:238001
CUB 1754..1862 CDD:238001
CUB 1979..2091 CDD:238001
CUB 2210..2321 CDD:238001
CUB 2327..2441 CDD:238001
CUB 2688..2782 CDD:412131
CUB 2810..2911 CDD:238001
CUB 3029..3143 CDD:238001
CUB 3169..3249 CDD:412131
CUB 3499..3607 CDD:238001
nas-25NP_495880.1 ZnMc_astacin_like 52..234 CDD:239807 22/109 (20%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.