DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cubn2 and sol-2

DIOPT Version :10

Sequence 1:NP_729748.3 Gene:Cubn2 / 39334 FlyBaseID:FBgn0259140 Length:3613 Species:Drosophila melanogaster
Sequence 2:NP_493560.1 Gene:sol-2 / 173336 WormBaseID:WBGene00010587 Length:436 Species:Caenorhabditis elegans


Alignment Length:331 Identity:74/331 - (22%)
Similarity:122/331 - (36%) Gaps:93/331 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly  1304 GAIETPNFPENYPPGQDCEWDIRAGGRKNHLQLIFSHL---SVEKFSSICLNDY--VSLVDMLDD 1363
            |.||:|.:|..:....||.::|.... .|.:||.|...   |..:.|..||:.|  |.:||....
 Worm    34 GFIESPGYPSAFSAPLDCIFNITTAA-SNVIQLSFVSFDLASKNQLSDQCLDSYLLVVVVDRHGR 97

  Fly  1364 QTLSEQHLCTNDGLEPITTVGNRLLLRFKSDSSVEL-QGFRAEYKRI------------------ 1409
            |.:.|: ||.|.....|.|:.:.:.::|.:.|:.:. :|||.:|:.:                  
 Worm    98 QHVGER-LCGNQVPLSINTMQSWMQVQFVTTSTNQKHRGFRIQYRILSEAAIQEPSSTLGESMFS 161

  Fly  1410 GCGEHLR--ESGGRFESPNAP--FSVDMDCVWIITASEGNQIRLLLHEVYFEAPQI-ECR----- 1464
            |||.|..  :..|...||..|  :..:..|.|:|......:|.:.:..::. ||.| ||.     
 Worm   162 GCGGHSTPGQLSGEILSPGYPTTYPKNSTCNWLIRVEARQRIYIRIVHLHL-APTIAECERASLT 225

  Fly  1465 ------------DAESSLSVSAPSGYNSSVVLFRSCHEETQTQTFTSPGNELVIRFVSSSAP--- 1514
                        |.:.|.|.::.:.:..|.:.:    .|...:::.|..|.:|:||::...|   
 Worm   226 IIDGYKHEKYGIDRKESTSETSEAKFCGSQLYY----AEEGMKSYLSSANRIVVRFITQEGPPSS 286

  Fly  1515 ----SRKYFKASFVQVPA------------SC-------GGYISASSG--------------VLT 1542
                .|..||..:..|..            ||       ||.:....|              .|.
 Worm   287 MIGEERIGFKVVWTAVEGLIGEGDESVNGNSCKDQFMCHGGQVCVEQGHGICASRSRLCIHSSLV 351

  Fly  1543 TPGFHN 1548
            ..|.||
 Worm   352 CDGIHN 357

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cubn2NP_729748.3 cubilin_NTD 38..141 CDD:412063
EGF_CA 156..190 CDD:238011
EGF_CA 192..233 CDD:238011
EGF_CA 290..328 CDD:214542
EGF_CA 330..374 CDD:214542
EGF 427..455 CDD:394967
EGF_CA 462..496 CDD:238011
CUB 503..619 CDD:238001
CUB 624..738 CDD:238001
CUB 745..854 CDD:238001
CUB 857..963 CDD:238001
CUB 1066..1179 CDD:238001
CUB 1185..1293 CDD:238001
CUB 1303..1406 CDD:238001 32/107 (30%)
CUB 1411..1523 CDD:238001 30/140 (21%)
CUB 1530..1648 CDD:238001 8/40 (20%)
CUB 1754..1862 CDD:238001
CUB 1979..2091 CDD:238001
CUB 2210..2321 CDD:238001
CUB 2327..2441 CDD:238001
CUB 2688..2782 CDD:412131
CUB 2810..2911 CDD:238001
CUB 3029..3143 CDD:238001
CUB 3169..3249 CDD:412131
CUB 3499..3607 CDD:238001
sol-2NP_493560.1 CUB 29..142 CDD:238001 33/109 (30%)
CUB 163..301 CDD:238001 30/142 (21%)
LDLa 320..369 CDD:238060 7/38 (18%)
Blue background indicates that the domain is not in the aligned region.

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