DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cubn2 and Mep1a

DIOPT Version :10

Sequence 1:NP_729748.3 Gene:Cubn2 / 39334 FlyBaseID:FBgn0259140 Length:3613 Species:Drosophila melanogaster
Sequence 2:NP_032611.2 Gene:Mep1a / 17287 MGIID:96963 Length:760 Species:Mus musculus


Alignment Length:230 Identity:49/230 - (21%)
Similarity:76/230 - (33%) Gaps:78/230 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    33 HLVRQSNDNLLLEPAWDRNVSLRLMGESA-TVTINDVDMMTVLRRRQ-------RIIADRQA--- 86
            ||....||.:|..|..:|...:.::.:.| |.....:.:|....:.|       .:|.||.:   
Mouse   501 HLYSGDNDAILEWPVENRQAIMTILDQEADTRNRMSLTLMFTTSKNQTSSAINGSVIWDRPSKVG 565

  Fly    87 -------------------------ARREPLKVDAV------RDMFHDVELKMTRIQRRIFSARN 120
                                     .||..||.|::      :|:.|   |..|.:..   |||:
Mouse   566 VYDKDCDCFRSLDWGWGQAISHQLLKRRNFLKGDSLIIFVDFKDLTH---LNRTEVPA---SARS 624

  Fly   121 STKR--------------------------SGLNQRILRRQLQRVERVKGILQTLAGNLARNECL 159
            :..|                          |.|.||...||.:.||....:.........|:.|.
Mouse   625 TMPRGLLLQGQESPALGESSRKAMLEESLPSSLGQRHPSRQKRSVENTGPMEDHNWPQYFRDPCD 689

  Fly   160 SNPCKNGGTCHDAYKGFQCECPAG----WQGDSCE 190
            .|||:|.|||.:......|.|.:|    :.|:.|:
Mouse   690 PNPCQNEGTCVNVKGMASCRCVSGHAFFYAGERCQ 724

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cubn2NP_729748.3 cubilin_NTD 38..141 CDD:412063 32/170 (19%)
EGF_CA 156..190 CDD:238011 12/37 (32%)
EGF_CA 192..233 CDD:238011
EGF_CA 290..328 CDD:214542
EGF_CA 330..374 CDD:214542
EGF 427..455 CDD:394967
EGF_CA 462..496 CDD:238011
CUB 503..619 CDD:238001
CUB 624..738 CDD:238001
CUB 745..854 CDD:238001
CUB 857..963 CDD:238001
CUB 1066..1179 CDD:238001
CUB 1185..1293 CDD:238001
CUB 1303..1406 CDD:238001
CUB 1411..1523 CDD:238001
CUB 1530..1648 CDD:238001
CUB 1754..1862 CDD:238001
CUB 1979..2091 CDD:238001
CUB 2210..2321 CDD:238001
CUB 2327..2441 CDD:238001
CUB 2688..2782 CDD:412131
CUB 2810..2911 CDD:238001
CUB 3029..3143 CDD:238001
CUB 3169..3249 CDD:412131
CUB 3499..3607 CDD:238001
Mep1aNP_032611.2 ZnMc 46..271 CDD:469599
MAM 281..444 CDD:459878
MATH 443..607 CDD:445786 19/105 (18%)
EGF 688..722 CDD:394967 12/33 (36%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.