DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cubn2 and LOC1278376

DIOPT Version :10

Sequence 1:NP_729748.3 Gene:Cubn2 / 39334 FlyBaseID:FBgn0259140 Length:3613 Species:Drosophila melanogaster
Sequence 2:XP_061509964.1 Gene:LOC1278376 / 1278376 VectorBaseID:AGAMI1_013207 Length:268 Species:Anopheles gambiae


Alignment Length:132 Identity:29/132 - (21%)
Similarity:43/132 - (32%) Gaps:46/132 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly  1960 WGVLDSNLVASNLSLTTGGCTKE----------LTLSH--------------------------- 1987
            |..|..||:|:.|:|...||.:.          |.|:|                           
Mosquito   125 WATLGMNLLANQLNLQREGCLETGVIMHQLLHVLGLTHPQSRPDRDFYVLVEQDAIDTSLKKNLD 189

  Fly  1988 ---HGDIELSSPGYPHGYAPNLNCEWTIRSQFPSHHIYAHSIIVDLEDYPACSADYLSIQSSRDL 2049
               .|.||  ..|.|:.|...|:|:........|:    .:.:|.|.|......:.||::..|.|
Mosquito   190 KYQQGVIE--DFGIPYDYESILHCQSDAFGSSASN----RATVVPLVDVEIGQRNELSLKDVRKL 248

  Fly  2050 IK 2051
            .|
Mosquito   249 NK 250

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cubn2NP_729748.3 cubilin_NTD 38..141 CDD:412063
EGF_CA 156..190 CDD:238011
EGF_CA 192..233 CDD:238011
EGF_CA 290..328 CDD:214542
EGF_CA 330..374 CDD:214542
EGF 427..455 CDD:394967
EGF_CA 462..496 CDD:238011
CUB 503..619 CDD:238001
CUB 624..738 CDD:238001
CUB 745..854 CDD:238001
CUB 857..963 CDD:238001
CUB 1066..1179 CDD:238001
CUB 1185..1293 CDD:238001
CUB 1303..1406 CDD:238001
CUB 1411..1523 CDD:238001
CUB 1530..1648 CDD:238001
CUB 1754..1862 CDD:238001
CUB 1979..2091 CDD:238001 21/113 (19%)
CUB 2210..2321 CDD:238001
CUB 2327..2441 CDD:238001
CUB 2688..2782 CDD:412131
CUB 2810..2911 CDD:238001
CUB 3029..3143 CDD:238001
CUB 3169..3249 CDD:412131
CUB 3499..3607 CDD:238001
LOC1278376XP_061509964.1 None
Blue background indicates that the domain is not in the aligned region.

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