DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gcat and SPTLC2

DIOPT Version :10

Sequence 1:NP_648509.1 Gene:Gcat / 39333 FlyBaseID:FBgn0036208 Length:417 Species:Drosophila melanogaster
Sequence 2:NP_004854.1 Gene:SPTLC2 / 9517 HGNCID:11278 Length:562 Species:Homo sapiens


Alignment Length:373 Identity:133/373 - (35%)
Similarity:202/373 - (54%) Gaps:24/373 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    64 KKILNFCANNYLGLANNP-EIVEHSQKLLEQYGAGLSSVRFICGTQDIHKQLEKKIAQFHGREDT 127
            |.::|..:.||||.|.|. ...|.:.|:||:||||:.|.|...|..|.|::||:.:|:|.|.|..
Human   168 KGVINMGSYNYLGFARNTGSCQEAAAKVLEEYGAGVCSTRQEIGNLDKHEELEELVARFLGVEAA 232

  Fly   128 ILYASCFDANAGIFEAILTPEDAVFSDELNHASIIDGIRLCKAKKQRYRHRDLGDLEEQLKASDA 192
            :.|...|..|:....|::.....:.||||||||::.|.||..|..:.::|.::..||:.||  ||
Human   233 MAYGMGFATNSMNIPALVGKGCLILSDELNHASLVLGARLSGATIRIFKHNNMQSLEKLLK--DA 295

  Fly   193 ------------RLKLIATDGVFSMDGNIAPLARIVELARKYNALVFVDECHATGFFGATGRGTE 245
                        :..||..:|::||:|:|..|..::.|.:||.|.:::||.|:.|..|.||||..
Human   296 IVYGQPRTRRPWKKILILVEGIYSMEGSIVRLPEVIALKKKYKAYLYLDEAHSIGALGPTGRGVV 360

  Fly   246 EYDNVMGE-VDIINSTLGKALGGASGGYTTGPAELISFLRQKSRPYLFSNTLPPAVVAVGLKVMD 309
            ||..:..| ||::..|..|:. ||||||..|..|||.:||..|...:::.:|.|.||...:..|.
Human   361 EYFGLDPEDVDVMMGTFTKSF-GASGGYIGGKKELIDYLRTHSHSAVYATSLSPPVVEQIITSMK 424

  Fly   310 MLL------QSSELTQRVQSNTQRFRQAMTKAGFTIAG-ENHPICPVMLGDARLASQFADEMLTR 367
            .::      ...|..|::..||:.||:.:.:.||.|.| |:.|:.|:||........|..|||.|
Human   425 CIMGQDGTSLGKECVQQLAENTRYFRRRLKEMGFIIYGNEDSPVVPLMLYMPAKIGAFGREMLKR 489

  Fly   368 GIYVIGFSYPVVPQGKARIRVQISAAHTEAEIDRAINAFIEVGRSLKV 415
            .|.|:...:|..|..::|.|..:|||||:..:|.|:....|||..|::
Human   490 NIGVVVVGFPATPIIESRARFCLSAAHTKEILDTALKEIDEVGDLLQL 537

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GcatNP_648509.1 PRK06939 19..416 CDD:235893 133/373 (36%)
SPTLC2NP_004854.1 AAT_I 67..542 CDD:450240 133/373 (36%)

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