DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gcat and Alas1

DIOPT Version :10

Sequence 1:NP_648509.1 Gene:Gcat / 39333 FlyBaseID:FBgn0036208 Length:417 Species:Drosophila melanogaster
Sequence 2:NP_077810.2 Gene:Alas1 / 65155 RGDID:68392 Length:642 Species:Rattus norvegicus


Alignment Length:400 Identity:138/400 - (34%)
Similarity:226/400 - (56%) Gaps:31/400 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    38 KDAGTFKAERIITSSQSTQITVQGSD--------KKILNFCANNYLGLANNPEIVEHSQKLLEQY 94
            |:..|::..:  |.::..||.....|        |::..:|:|:|||::.:|.:.....:.::|:
  Rat   213 KNDHTYRVFK--TVNRRAQIFPMADDYTDSLITKKQVSVWCSNDYLGMSRHPRVCGAVIETVKQH 275

  Fly    95 GAGLSSVRFICGTQDIHKQLEKKIAQFHGREDTILYASCFDAN-AGIFE-AILTPEDAVFSDELN 157
            |||....|.|.||...|.:||:::|..||::..:|::|||.|| :.:|. |.:.|...::||..|
  Rat   276 GAGAGGTRNISGTSKFHVELEQELADLHGKDAALLFSSCFVANDSTLFTLAKMMPGCEIYSDSGN 340

  Fly   158 HASIIDGIRLCKAKKQRYRHRDLGDLEEQLKASDARL-KLIATDGVFSMDGNIAPLARIVELARK 221
            |||:|.|||..:..|..:||.|:..|.|.|:.||..: |::|.:.|.||||.:.||..:.::|.:
  Rat   341 HASMIQGIRNSRVPKYIFRHNDVNHLRELLQRSDPSVPKIVAFETVHSMDGAVCPLEELCDVAHE 405

  Fly   222 YNALVFVDECHATGFFGATGRGTEEYDNVMGEVDIINSTLGKALGGASGGYTTGPAELISFLRQK 286
            :.|:.||||.||.|.:||:|.|..:.|.||.::|||:.|||||. |..|||....:.||..:|..
  Rat   406 FGAITFVDEVHAVGLYGASGGGIGDRDGVMPKMDIISGTLGKAF-GCVGGYIASTSLLIDTVRSY 469

  Fly   287 SRPYLFSNTLPPAVVAVGLKVMDMLLQSSE---LTQRVQSNTQRFRQAMTKAGFTIAGENHPICP 348
            :..::|:.:|||.::|..|:.: .:|:|:|   |.::.|.|.:..||.:..||..:......|.|
  Rat   470 AAGFIFTTSLPPMLLAGALESV-RILKSNEGRALRRQHQRNVKLMRQMLMDAGLPVIHCPSHIIP 533

  Fly   349 VMLGDARLASQFADEMLTR-GIYVIGFSYPVVPQGKARIRVQISAAHTEAEIDRAINAFIE---- 408
            |.:.||...::..||::|| .|||...:||.||:|:..:|:..:..||    .:.:|.|:|    
  Rat   534 VRVADAAKNTEICDELMTRHNIYVQAINYPTVPRGEELLRIAPTPHHT----PQMMNFFLEKLLL 594

  Fly   409 ----VGRSLK 414
                ||..||
  Rat   595 TWKRVGLELK 604

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GcatNP_648509.1 PRK06939 19..416 CDD:235893 137/399 (34%)
Alas1NP_077810.2 Preseq_ALAS 2..140 CDD:462658
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 51..109
AAT_I 199..604 CDD:450240 136/398 (34%)
Blue background indicates that the domain is not in the aligned region.

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