DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gcat and sptlc1

DIOPT Version :10

Sequence 1:NP_648509.1 Gene:Gcat / 39333 FlyBaseID:FBgn0036208 Length:417 Species:Drosophila melanogaster
Sequence 2:NP_001018307.1 Gene:sptlc1 / 553981 ZFINID:ZDB-GENE-050522-61 Length:472 Species:Danio rerio


Alignment Length:399 Identity:106/399 - (26%)
Similarity:193/399 - (48%) Gaps:38/399 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    48 IITSSQSTQITVQGSDKKILNFCANNYLGLANNPEIVEHSQKLLEQYGAGLSSVRFICGTQDIHK 112
            ::|...|.:|.|.|  |:.:||.:.|:|||.:|..:...:...|::||.|....|...||.|:|.
Zfish    83 VVTGPPSHKIIVNG--KECINFASFNFLGLLDNERVKLKALASLKKYGVGTCGPRGFYGTFDVHL 145

  Fly   113 QLEKKIAQFHGREDTILYASCFDANAGIFEAILTPEDAVFSDELNHASIIDGIRLCKAKKQRYRH 177
            :||:::|:|...|:.|:|:..|...|....|.....|.:|.||....||..|::..::..:.::|
Zfish   146 ELEERLAKFMRTEEAIIYSYGFATIASAIPAYSKRGDIIFVDEAACFSIQKGLQASRSFIKYFKH 210

  Fly   178 RDLGDLEEQLKASD---------ARL--KLIATDGVFSMDGNIAPLARIVELARKYNALVFVDEC 231
            .|:.|||..||..:         ||:  :.|..:|::....:|.||..:|:|..||...:|::|.
Zfish   211 NDMEDLERLLKEQEIEDQKNPRKARVIRRFILVEGLYINTADICPLPELVKLKYKYKVRIFLEES 275

  Fly   232 HATGFFGATGRGTEEYDNV-MGEVDIINSTLGKALGGASGGYTTGPAELISFLRQKSRPYLFSNT 295
            .:.|..|..|||..|:..| :.::|:|::.:..|| .:.||:..|.:.:|...|...:.|.||.:
Zfish   276 MSFGVLGEHGRGVTEHFGVNIDDIDLISANMENAL-ASIGGFCCGRSFVIDHQRLSGQGYCFSAS 339

  Fly   296 LPPAVVAVGLKVMDMLLQSSELTQRVQSNTQRFRQAMT-KAGFTIAGENHPICPVM--------- 350
            |||.:.|..::.::::.:...:.:.::...:...:|:. .||..:.||:  ..|.:         
Zfish   340 LPPMLAAAAIEALNIMEEDPGIFRVLREKCRNVHKALQGTAGLKVVGES--FAPALHLQLENSTG 402

  Fly   351 --LGDARLASQFADEMLTRGIYVIGFSY-----PVVPQGKARIRVQISAAHTEAEIDRAINAFIE 408
              :.|.:|.....|..|.|.:.:....|     ..:|  ...|||.::...|:.||::|.....|
Zfish   403 SRVNDLKLLRAIVDYSLDRQVALTLARYLDKEERFLP--PPSIRVVVTVEQTQEEIEKAAQCIRE 465

  Fly   409 VGRSLKVIK 417
            .  :|.|:|
Zfish   466 A--ALHVLK 472

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GcatNP_648509.1 PRK06939 19..416 CDD:235893 104/396 (26%)
sptlc1NP_001018307.1 AAT_I 23..472 CDD:450240 105/397 (26%)

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